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Subject: [OMPI users] Problem compiling 1.4.0 snap with PGI 10.0-1 and openib flags turned on ...
From: Richard Walsh (Richard.Walsh_at_[hidden])
Date: 2009-12-19 12:18:04


Succeeded in overcoming the 'libtool' failure with PGI using
the patched snap (thanks Jeff), but now I am running
into a down stream problem compiling for our IB clusters.
I am using the latest PGI compiler (10.0-1) and the 12-14-09
snap of OpenMPI of version 1.4.0.

My configure line looks like this:

$ ./configure CC=pgcc CXX=pgCC F77=pgf77 FC=pgf90 --enable-openib-ibcm --with-openib \
--prefix=/share/apps/openmpi-pgi/1.4.0 --with-tm=/share/apps/pbs/

The error I get during the make at about line 8078 is:

libtool: compile: pgcc -DHAVE_CONFIG_H -I. -I../../../../opal/include -I../../../../orte/include -I../../../../ompi/include -I../../../../opal/mca/paffinity/linux/plpa/src/libplpa -I../../../.. -D_REENTRANT -O -DNDEBUG -c connect/btl_openib_connect_xoob.c -fpic -DPIC -o connect/.libs/btl_openib_connect_xoob.o
source='connect/btl_openib_connect_ibcm.c' object='connect/btl_openib_connect_ibcm.lo' libtool=yes \
DEPDIR=.deps depmode=none /bin/sh ../../../../config/depcomp \
/bin/sh ../../../../libtool --tag=CC --mode=compile pgcc -DHAVE_CONFIG_H -I. -I../../../../opal/include -I../../../../orte/include -I../../../../ompi/include -I../../../../opal/mca/paffinity/linux/plpa/src/libplpa -I../../../.. -D_REENTRANT -O -DNDEBUG -c -o connect/btl_openib_connect_ibcm.lo connect/btl_openib_connect_ibcm.c
libtool: compile: pgcc -DHAVE_CONFIG_H -I. -I../../../../opal/include -I../../../../orte/include -I../../../../ompi/include -I../../../../opal/mca/paffinity/linux/plpa/src/libplpa -I../../../.. -D_REENTRANT -O -DNDEBUG -c connect/btl_openib_connect_ibcm.c -fpic -DPIC -o connect/.libs/btl_openib_connect_ibcm.o
PGC-S-0040-Illegal use of symbol, __le64 (/usr/include/linux/byteorder/little_endian.h: 43)
PGC-W-0156-Type not specified, 'int' assumed (/usr/include/linux/byteorder/little_endian.h: 43)
PGC-S-0039-Use of undeclared variable __le64 (/usr/include/linux/byteorder/little_endian.h: 45)
PGC-S-0104-Non-numeric operand for multiplicative operator (/usr/include/linux/byteorder/little_endian.h: 45)
PGC-S-0040-Illegal use of symbol, __le64 (/usr/include/linux/byteorder/little_endian.h: 47)
PGC-S-0040-Illegal use of symbol, __be64 (/usr/include/linux/byteorder/little_endian.h: 67)
PGC-W-0156-Type not specified, 'int' assumed (/usr/include/linux/byteorder/little_endian.h: 67)
PGC-S-0040-Illegal use of symbol, __be64 (/usr/include/linux/byteorder/little_endian.h: 69)
PGC-W-0156-Type not specified, 'int' assumed (/usr/include/linux/byteorder/little_endian.h: 69)PGC-S-0040-Illegal use of symbol, __be64 (/usr/include/linux/byteorder/little_endian.h: 71)
PGC-W-0156-Type not specified, 'int' assumed (/usr/include/linux/byteorder/little_endian.h: 71)PGC/x86-64 Linux 10.0-1: compilation completed with severe errors
make[2]: *** [connect/btl_openib_connect_ibcm.lo] Error 1
make[2]: Leaving directory `/export/apps/openmpi-pgi/1.4.0/build/ompi/mca/btl/openib'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/export/apps/openmpi-pgi/1.4.0/build/ompi'
make: *** [all-recursive] Error 1

Compilation with the latest Intel compilers and these 'openib' options completes
without issue.

Are my configure options for 'openib' correct? Has anyone else see this?

Thanks much,

Richard Walsh
Parallel Applications and Systems Manager
CUNY HPC Center, Staten Island, NY

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