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Subject: [OMPI users] Help: Program Terminated
From: Lee Amy (openlinuxsource_at_[hidden])
Date: 2008-05-29 04:10:30


I use a bioinformatics software called MicroTar to do some work. But it
seems that it dosen't finish well.

MicroTar parallel version was terminated after 463 minutes with following
error messages:
[gnode5:31982] [ 0] /lib64/tls/ [0x345460c430]
[gnode5:31982] [ 1] microtar(LocateNuclei+0x137) [0x403037]
[gnode5:31982] [ 2] microtar(main+0x4ac) [0x40431c]
[gnode5:31982] [ 3] /lib64/tls/
[gnode5:31982] [ 4] microtar [0x402e6a]
[gnode5:31982] *** End of error message ***
mpirun noticed that job rank 0 with PID 18710 on node gnode1 exited on
signal 15 (Terminated).
19 additional processes aborted (not shown)
And gnode5 is a slave node, gnode1 is the master node. I run MicroTar in
gnode1 by using Open MPI 1.2.6 mpirun.

The OS is Cent OS 4. Processor is AMD Opteron 270HE.

So from that what can we know? It's a MPI problem or I didn't compile
MicroTar properly?

Thank you very much~

Best Regards,

Amy Lee