Hi,
I am just getting my feet wet with openmpi and can't
seem to get it running. I installed openmpi and all it's components via
yum and am able compile and run programs with mpi locally but not
across the two computers. I set up the keyed ssh on both mechines and
am able to log into another without asking for a password. From reading
online it looks like my problem may stem from an unconfigured
.bash_profile as I don't think yum would have configured it for me. My
question is where does yum stick the bin and lib files that I need to
reference in my profile? What should my bash_profile look like? Thank
you for reading and am eagerly awaiting your reply.
-Jacob
My Profile:
# .bash_profile
# Get the aliases and functions
if [ -f ~/.bashrc ]; then
. ~/.bashrc
fi
# User specific environment and startup programs
PATH=$PATH:$HOME/bin
export PATH
When I try to run it:
[beowulf2@localhost Desktop]$ mpirun --hostfile hostfile -np 4 a.out
[localhost.localdomain:08564] Error: unknown option "--bootproxy"
input in flex scanner failed
[localhost.localdomain:06428] [0,0,0] ORTE_ERROR_LOG: Timeout in file base/pls_base_orted_cmds.c at line 275
[localhost.localdomain:06428] [0,0,0] ORTE_ERROR_LOG: Timeout in file pls_rsh_module.c at line 1166
[localhost.localdomain:06428] [0,0,0] ORTE_ERROR_LOG: Timeout in file errmgr_hnp.c at line 90
[localhost.localdomain:06428] ERROR: A daemon on node 192.168.0.3 failed to start as expected.
[localhost.localdomain:06428] ERROR: There may be more information available from
[localhost.localdomain:06428] ERROR: the remote shell (see above).
[localhost.localdomain:06428] ERROR: The daemon exited unexpectedly with status 2.
[localhost.localdomain:06428] [0,0,0] ORTE_ERROR_LOG: Timeout in file base/pls_base_orted_cmds.c at line 188
[localhost.localdomain:06428] [0,0,0] ORTE_ERROR_LOG: Timeout in file pls_rsh_module.c at line 1198
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