Sorry I made a mistake to insert into zipped files.

So I send it once again.

regards


On 23/04/10 20.01, "Francesco Iannone" <francesco.iannone@frascati.enea.it> wrote:

Dear all

I rebuilt openmpi 1.4.1 with PGI 10.2.1 enabling the libpgnuma.a of PGI.

Linux kernel 2.6.18-164.11.1.el5 #1 SMP Sat Jan 23 21:22:33 CET 2010 x86_64 x86_64 x86_64 GNU/Linux

I have the follow problem to rebuild the package considering libnuma.a as symbolic link to PGI NUMA library libpgnuma.a:

/bin/sh ../../../libtool --tag=CC   --mode=link pgcc  -O -DNDEBUG    -export-dynamic   -o opal_wrapper opal_wrapper.o ../../../opal/libopen-pal.la -lnsl -lutil  -lpthread
libtool: link: pgcc -O -DNDEBUG -o .libs/opal_wrapper opal_wrapper.o -Wl,--export-dynamic  ../../../opal/.libs/libopen-pal.so -L/afs/efda-itm.eu/project/compilers/pgi10.2/linux86-64/2010/libso/ -lnuma -ldl -lnsl -lutil -lpthread -Wl,-rpath -Wl,/opt/mpi/openmpi-1.4.1/pgi/lib
../../../opal/.libs/libopen-pal.so: undefined reference to `mbind'
../../../opal/.libs/libopen-pal.so: undefined reference to `numa_setlocal_memory'
../../../opal/.libs/libopen-pal.so: undefined reference to `numa_set_strict'
make[2]: *** [opal_wrapper] Error 2
make[2]: Leaving directory `/afs/efda-itm.eu/project/mpi/openmpi-1.4.1_build_pgi/opal/tools/wrappers'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/afs/efda-itm.eu/project/mpi/openmpi-1.4.1_build_pgi/opal'
make: *** [all-recursive] Error 1

Attached you find the output of the configure and make zipped.

Could somebody help me.

Thanks in advance

regards

Dr. Francesco Iannone
Associazione EURATOM-ENEA sulla Fusione
C.R. ENEA Frascati
Via E. Fermi 45
00044 Frascati (Roma) Italy
phone 00-39-06-9400-5124
fax 00-39-06-9400-5524
mailto:francesco.iannone@frascati.enea.it
http://www.afs.enea.it/iannone


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Dr. Francesco Iannone
Associazione EURATOM-ENEA sulla Fusione
C.R. ENEA Frascati
Via E. Fermi 45
00044 Frascati (Roma) Italy
phone 00-39-06-9400-5124
fax 00-39-06-9400-5524
mailto:francesco.iannone@frascati.enea.it
http://www.afs.enea.it/iannone