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Subject: Re: [OMPI users] Determining what parameters a scheduler passes to OpenMPI
From: Reuti (reuti_at_[hidden])
Date: 2014-06-06 13:01:13


Am 06.06.2014 um 18:58 schrieb Sasso, John (GE Power & Water, Non-GE):

> OK, so at the least, how can I get the node and slots/node info that is passed from PBS?
>
> I ask because I’m trying to troubleshoot a problem w/ PBS and the build of OpenMPI 1.6 I noted. If I submit a 24-process simple job through PBS using a script which has:
>
> /usr/local/openmpi/bin/orterun -n 24 --hostfile /home/sasso/TEST/hosts.file --mca orte_rsh_agent rsh --mca btl openib,tcp,self --mca orte_base_help_aggregate 0 -x PATH -x LD_LIBRARY_PATH /home/sasso/TEST/simplempihello.exe

Using the --hostfile on your own would mean to violate the granted slot allocation by PBS. Just leave this option out. How do you submit your job?

-- Reuti

> And the hostfile /home/sasso/TEST/hosts.file contains 24 entries (the first 16 being host node0001 and the last 8 being node0002), it appears that 24 MPI tasks try to start on node0001 instead of getting distributed as 16 on node0001 and 8 on node0002. Hence, I am curious what is being passed by PBS.
>
> --john
>
>
> From: users [mailto:users-bounces_at_[hidden]] On Behalf Of Ralph Castain
> Sent: Friday, June 06, 2014 12:31 PM
> To: Open MPI Users
> Subject: Re: [OMPI users] Determining what parameters a scheduler passes to OpenMPI
>
> We currently only get the node and slots/node info from PBS - we don't get any task placement info at all. We then use the mpirun cmd options and built-in mappers to map the tasks to the nodes.
>
> I suppose we could do more integration in that regard, but haven't really seen a reason to do so - the OMPI mappers are generally more flexible than anything in the schedulers.
>
>
> On Jun 6, 2014, at 9:08 AM, Sasso, John (GE Power & Water, Non-GE) <John1.Sasso_at_[hidden]> wrote:
>
>
> For the PBS scheduler and using a build of OpenMPI 1.6 built against PBS include files + libs, is there a way to determine (perhaps via some debugging flags passed to mpirun) what job placement parameters are passed from the PBS scheduler to OpenMPI? In particular, I am talking about task placement info such as nodes to place on, etc. Thanks!
>
> --john
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