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Subject: Re: [OMPI users] [EXTERNAL] Re: What version of PMI (Cray XE6) is working for OpenMPI-1.6.5?
From: Teranishi, Keita (knteran_at_[hidden])
Date: 2013-09-03 16:19:07


Nathan,

Thanks for the help. I can run a job using openmpi, assigning a signle
process per node. However, I have been failing to run a job using
multiple MPI ranks in a single node. In other words, "mpiexec
--bind-to-core --npernode 16 --n 16 ./test" never works (apron -n 16 works
fine). DO you have any thought about it?

Thanks,
---------------------------------------------
Keita Teranishi
R&D Principal Staff Member
Scalable Modeling and Analysis Systems
Sandia National Laboratories
Livermore, CA 94551

On 8/30/13 8:49 AM, "Hjelm, Nathan T" <hjelmn_at_[hidden]> wrote:

>Replace install_path to where you want Open MPI installed.
>
>./configure --prefix=install_path
>--with-platform=contrib/platform/lanl/cray_xe6/optimized-luster
>make
>make install
>
>To use Open MPI just set the PATH and LD_LIBRARY_PATH:
>
>PATH=install_path/bin:$PATH
>LD_LIBRARY_PATH=install_path/lib:$LD_LIBRARY_PATH
>
>You can then use mpicc, mpicxx, mpif90, etc to compile and either mpirun
>or aprun to run. If you are running at scale I would recommend against
>using aprun for now. I also recommend you change your programming
>environment to either PrgEnv-gnu or PrgEnv-intel. The PGI compiler can be
>a PIA. It is possible to build with the Cray compiler but it takes
>patching the config.guess and changing some autoconf stuff.
>
>-Nathan
>
>Please excuse the horrible Outlook-style quoting.
>________________________________________
>From: users [users-bounces_at_[hidden]] on behalf of Teranishi, Keita
>[knteran_at_[hidden]]
>Sent: Thursday, August 29, 2013 8:01 PM
>To: Open MPI Users
>Subject: Re: [OMPI users] [EXTERNAL] Re: What version of PMI (Cray XE6)
>is working for OpenMPI-1.6.5?
>
>Thanks for the info. Is it still possible to build by myself? What is
>the procedure other than configure script?
>
>
>
>
>
>On 8/23/13 2:37 PM, "Nathan Hjelm" <hjelmn_at_[hidden]> wrote:
>
>>On Fri, Aug 23, 2013 at 09:14:25PM +0000, Teranishi, Keita wrote:
>>> Hi,
>>> I am trying to install OpenMPI 1.6.5 on Cray XE6 and very curious
>>>with the
>>> current support of PMI. In the previous discussions, there was a
>>>comment
>>> on the version of PMI (it works with 2.1.4, but fails with 3.0).
>>>Our
>>
>>Open MPI 1.6.5 does not have support for the XE-6. Use 1.7.2 instead.
>>
>>> machine has PMI2.1.4 and PMI4.0 (default). Which version do you
>>
>>There was a regression in PMI 3.x.x that still exists in 4.0.x that
>>causes a warning to be printed on every rank when using mpirun. We are
>>working with Cray to resolve the issue. For now use 2.1.4. See the
>>platform files in contrib/platform/lanl/cray_xe6. The platform files you
>>would want to use are debug-lustre or optimized-lusre.
>>
>>BTW, 1.7.2 is installed on Cielo and Cielito. Just run:
>>
>>module swap PrgEnv-pgi PrgEnv-gnu (PrgEnv-intel also works)
>>module unload cray-mpich2 xt-libsci
>>module load openmpi/1.7.2
>>
>>
>>-Nathan Hjelm
>>Open MPI Team, HPC-3, LANL
>>_______________________________________________
>>users mailing list
>>users_at_[hidden]
>>http://www.open-mpi.org/mailman/listinfo.cgi/users
>
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