Open MPI logo

Open MPI User's Mailing List Archives

  |   Home   |   Support   |   FAQ   |  

This web mail archive is frozen.

This page is part of a frozen web archive of this mailing list.

You can still navigate around this archive, but know that no new mails have been added to it since July of 2016.

Click here to be taken to the new web archives of this list; it includes all the mails that are in this frozen archive plus all new mails that have been sent to the list since it was migrated to the new archives.

Subject: Re: [OMPI users] call to fork() error
From: Don Armstrong (don_at_[hidden])
Date: 2012-05-10 14:10:28

On Thu, 10 May 2012, Jim Maas wrote:
> I'm getting the following error when running an open-mpi job on a
> LSF cluster using a new version of R 2.15. I didn't get the error
> message when running previously using R 2.13. Could anyone point me
> to the possible cause, or how to find the offending code? I'm not a
> sysop, just a user.

Presumably some call that R is making is invoking system() when it
used to handle it internally. strace'ing the R process will tell you
what call it is making, and from that you can track down the code that
makes that call.

Don Armstrong

6: I'm human. I have a thousand flaws. I break down. I get up or I
don't get up. I get lost. I make the same mistakes over and over. I
have scars and wounds. Sometimes when I can't bear them anymore, I
drink. You can't fix me. You can't fix any of us. You can't make us
 -- "The Prisoner (2009 Miniseries)" _Checkmate_