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Subject: Re: [OMPI users] redirecting output
From: Prentice Bisbal (prentice_at_[hidden])
Date: 2012-04-02 11:27:20


On 03/30/2012 11:12 AM, Tim Prince wrote:
> On 03/30/2012 10:41 AM, tyler.balson_at_[hidden] wrote:
>>
>>
>> I am using the command mpirun -np nprocs -machinefile machines.arch
>> Pcrystal and my output strolls across my terminal I would like to
>> send this output to a file and I cannot figure out how to do so....I
>> have tried the general > FILENAME and > log & ....these generate
>> files however they are empty.....any help would be appreciated.

If you see the output on your screen, but it's not being redirected to a
file, it must be printing to STDERR and not STDOUT. The '>' by itself
redirects STDOUT only, so it doesn't redirect error messages. To
redirect STDERR, you can use '2>', which says redirect filehandle # 2,
which is stderr.

some_command 2> myerror.log

or

some_command >myoutput.log 2>myerror.log

 To redirect both STDOUT and STDERR to the same place, use the syntax
"2>&1" to tie STDERR to STDOUT:

some_command > myoutput.log 2>&1

I prefer to see the ouput on the screen at the same time I write it to a
file. That way, if the command hangs for some reason, I know it
immediately. I find the 'tee' command priceless for this:

some_command 2>&1 | tee myoutput.log

Google for 'bash output redirection' and you'll find many helpful pages
with better explanation and examples, like this one:

http://tldp.org/HOWTO/Bash-Prog-Intro-HOWTO-3.html

If you don't you bash, those results will be much less helpful.

I hope that helps, or at least gets you pointed in the right direction.

--
Prentice
>
> If you run under screen your terminal output should be collected in
> screenlog.  Beats me why some sysadmins don't see fit to install screen.
>