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Subject: Re: [OMPI users] open-mpi error
From: Markus Stiller (pge08fjv_at_[hidden])
Date: 2011-11-24 16:59:04


On 11/24/2011 10:08 PM, MM wrote:
> Hi
>
> I get the same error while linking against home built 1.5.4 openmpi libs on
> win32.
> I didn't get this error against the prebuilt libs.
>
> I see you use Suse. There probably is a openmpi.rpm or openmpi.dpkg already
> available for Suse which contains the libraries and you could link against
> those and that may work
>
> MM
>
> -----Original Message-----
> From: users-bounces_at_[hidden] [mailto:users-bounces_at_[hidden]] On
> Behalf Of Markus Stiller
> Sent: 24 November 2011 20:41
> To: users_at_[hidden]
> Subject: [OMPI users] open-mpi error
>
> Hello,
>
> i have some problem with mpi, i looked in the FAQ and google already but i
> couldnt find a solution.
>
> To build mpi i used this:
> shell$ ./configure --prefix=/opt/mpirun
> <...lots of output...>
> shell$ make all install
>
> Worked fine so far. I am using dlpoly, and this makefile:
> $(MAKE) LD="mpif90 -o" LDFLAGS="-O3" \
> FC="mpif90 -c" FCFLAGS="-O3" \
> EX=$(EX) BINROOT=$(BINROOT) $(TYPE)
>
> This worked fine too,
> the problem occurs when i want to run a job with
> mpiexec -n 4 ./DLPOLY.Z or
> mpirun -n 4 ./DLPOLY.z
>
> I get this error:
> --------------------------------------------------------------------------
> [linux-6wa6:02927] [[INVALID],INVALID] ORTE_ERROR_LOG: Not found in file
> orterun.c at line 543 markus_at_linux-6wa6:/media/808CCB178CCB069E/MD
> Simulations/Test Simu1> sudo mpiexec -n 4 ./DLPOLY.Z [linux-6wa6:03731]
> [[INVALID],INVALID] ORTE_ERROR_LOG: Not found in file runtime/orte_init.c at
> line 125
> --------------------------------------------------------------------------
> It looks like orte_init failed for some reason; your parallel process is
> likely to abort. There are many reasons that a parallel process can fail
> during orte_init; some of which are due to configuration or environment
> problems. This failure appears to be an internal failure; here's some
> additional information (which may only be relevant to an Open MPI
> developer):
>
> orte_ess_base_select failed
> --> Returned value Not found (-13) instead of ORTE_SUCCESS
> --------------------------------------------------------------------------
> [linux-6wa6:03731] [[INVALID],INVALID] ORTE_ERROR_LOG: Not found in file
> orterun.c at line 543
>
>
> Some Informations:
> I use Open MPI 1.4.4, Suse 64bit, AMD quadcore
>
> make check gives:
> make: *** No rule to make target `check'. Stop.
> I attached the ompi_info.
>
> Thx alot for your help,
>
> regards,
> Markus
>
>
> _______________________________________________
> users mailing list
> users_at_[hidden]
> http://www.open-mpi.org/mailman/listinfo.cgi/users
>
Hi,

thx for your answer.
When i try this (with mpich) i get problems with dl_poly itself:
/usr/lib64/gcc/x86_64-suse-linux/4.6/../../../../x86_64-suse-linux/bin/ld:
cannot find -lmpi_f90
/usr/lib64/gcc/x86_64-suse-linux/4.6/../../../../x86_64-suse-linux/bin/ld:
cannot find -lmpi_f77
/usr/lib64/gcc/x86_64-suse-linux/4.6/../../../../x86_64-suse-linux/bin/ld:
cannot find -lmpi
/usr/lib64/gcc/x86_64-suse-linux/4.6/../../../../x86_64-suse-linux/bin/ld:
cannot find -lopen-rte
/usr/lib64/gcc/x86_64-suse-linux/4.6/../../../../x86_64-suse-linux/bin/ld:
cannot find -lopen-pal

I do not really know how to get rid of this either ^^