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Subject: [OMPI users] Cofigure(?) problem building /1.5.3 on ScientificLinux6.0
From: Paul Kapinos (kapinos_at_[hidden])
Date: 2011-07-22 11:12:38


Dear OpenMPI volks,
currently I have a problem by building the version 1.5.3 of OpenMPI on
Scientific Linux 6.0 systems, which seem vor me to be a configuration
problem.

After the configure run (which seem to terminate without error code),
the "gmake all" stage produces errors and exits.

Typical is the output below.

Fancy: the 1.4.3 version on same computer can be build with no special
trouble. Both the 1.4.3 and 1.5.3 versions can be build on other
computer running CentOS 5.6.

In each case I build 16 versions at all (4 compiler * 32bit/64bit *
support for multithreading ON/OFF). The same error arise in all 16 versions.

Can someone give a hint about how to avoid this issue? Thanks!

Best wishes,

Paul

Some logs and configure are downloadable here:
https://gigamove.rz.rwth-aachen.de/d/id/2jM6MEa2nveJJD

   The configure line is in RUNME.sh, the
logs of configure and build stage in log_* files; I also attached the
config.log file and the configure itself (which is the standard from the
1.5.3 release).

######################################################################

CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh
/tmp/pk224850/linuxc2_11254/openmpi-1.5.3mt_linux64_gcc/config/missing
--run aclocal-1.11 -I config
sh: config/ompi_get_version.sh: No such file or directory
/usr/bin/m4: esyscmd subprocess failed

<last message repeated 12x>

configure.ac:953: warning: OMPI_CONFIGURE_SETUP is m4_require'd but not
m4_defun'd
config/ompi_mca.m4:37: OMPI_MCA is expanded from...
configure.ac:953: the top level
configure.ac:953: warning: AC_COMPILE_IFELSE was called before
AC_USE_SYSTEM_EXTENSIONS
../../lib/autoconf/specific.m4:386: AC_USE_SYSTEM_EXTENSIONS is expanded
from...
opal/mca/paffinity/hwloc/hwloc/config/hwloc.m4:152:
HWLOC_SETUP_CORE_AFTER_C99 is expanded from...
../../lib/m4sugar/m4sh.m4:505: AS_IF is expanded from...
opal/mca/paffinity/hwloc/hwloc/config/hwloc.m4:22: HWLOC_SETUP_CORE is
expanded from...
opal/mca/paffinity/hwloc/configure.m4:40: MCA_paffinity_hwloc_CONFIG is
expanded from...
config/ompi_mca.m4:540: MCA_CONFIGURE_M4_CONFIG_COMPONENT is expanded
from...
config/ompi_mca.m4:326: MCA_CONFIGURE_FRAMEWORK is expanded from...
config/ompi_mca.m4:247: MCA_CONFIGURE_PROJECT is expanded from...
configure.ac:953: warning: AC_RUN_IFELSE was called before
AC_USE_SYSTEM_EXTENSIONS

-- 
Dipl.-Inform. Paul Kapinos   -   High Performance Computing,
RWTH Aachen University, Center for Computing and Communication
Seffenter Weg 23,  D 52074  Aachen (Germany)
Tel: +49 241/80-24915