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Subject: [OMPI users] ifort 12.0.4 install problem
From: Virginie trinite (vtrinite_at_[hidden])
Date: 2011-06-06 10:43:03


Hello

I try to compile open-mpi with ifort 12.0.4. My system is ubuntu
lucid. Previous intallation with ifort 11.1 was fine.

configure and make all seems to work well, but make install report an error:
libtool: line 7847: icc: command not found
libtool: install: error: relink `lipopen-rte.la' with the above
command before installing it

I want to underline that icc is a knom command for bash.
I have check the FAQ and it seems to me that the problem is more like
the one report for IBM compiler. So I try with
configure CC=icc CXX=icpc F77=ifort FC=ifort --disable-shared --enable-static
Now the install finish without error, but when I try to run mpi I have
error message:

No available pml components were found
This mean ......

....
PML ob1 cannot be selected

The output of ompi_info is:

                Package: Open MPI user_at_CAPYS Distribution
                Open MPI: 1.4.3
   Open MPI SVN revision: r23834
   Open MPI release date: Oct 05, 2010
                Open RTE: 1.4.3
   Open RTE SVN revision: r23834
   Open RTE release date: Oct 05, 2010
                    OPAL: 1.4.3
       OPAL SVN revision: r23834
       OPAL release date: Oct 05, 2010
            Ident string: 1.4.3
                  Prefix: /usr/local
 Configured architecture: x86_64-unknown-linux-gnu
          Configure host: CAPYS
           Configured by: user
           Configured on: Mon Jun 6 11:00:10 CEST 2011
          Configure host: CAPYS
                Built by: user
                Built on: lundi 6 juin 2011, 11:03:21 (UTC+0200)
              Built host: CAPYS
              C bindings: yes
            C++ bindings: yes
      Fortran77 bindings: yes (all)
      Fortran90 bindings: yes
 Fortran90 bindings size: small
              C compiler: icc
     C compiler absolute: /opt/intel/composerxe-2011.4.191/bin/intel64/icc
            C++ compiler: icpc
   C++ compiler absolute: /opt/intel/composerxe-2011.4.191/bin/intel64/icpc
      Fortran77 compiler: ifort
  Fortran77 compiler abs: /opt/intel/composerxe-2011.4.191/bin/intel64/ifort
      Fortran90 compiler: ifort
  Fortran90 compiler abs: /opt/intel/composerxe-2011.4.191/bin/intel64/ifort
             C profiling: yes
           C++ profiling: yes
     Fortran77 profiling: yes
     Fortran90 profiling: yes
          C++ exceptions: no
          Thread support: posix (mpi: no, progress: no)
           Sparse Groups: no
  Internal debug support: no
     MPI parameter check: runtime
Memory profiling support: no
Memory debugging support: no
         libltdl support: yes
   Heterogeneous support: no
 mpirun default --prefix: no
         MPI I/O support: yes
       MPI_WTIME support: gettimeofday
Symbol visibility support: yes
   FT Checkpoint support: no (checkpoint thread: no)
           MCA backtrace: execinfo (MCA v2.0, API v2.0, Component v1.4.3)
              MCA memory: ptmalloc2 (MCA v2.0, API v2.0, Component v1.4.3)
           MCA paffinity: linux (MCA v2.0, API v2.0, Component v1.4.3)
               MCA carto: auto_detect (MCA v2.0, API v2.0, Component v1.4.3)
               MCA carto: file (MCA v2.0, API v2.0, Component v1.4.3)
           MCA maffinity: first_use (MCA v2.0, API v2.0, Component v1.4.3)
               MCA timer: linux (MCA v2.0, API v2.0, Component v1.4.3)
         MCA installdirs: env (MCA v2.0, API v2.0, Component v1.4.3)
         MCA installdirs: config (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA dpm: orte (MCA v2.0, API v2.0, Component v1.4.3)
              MCA pubsub: orte (MCA v2.0, API v2.0, Component v1.4.3)
           MCA allocator: basic (MCA v2.0, API v2.0, Component v1.4.3)
           MCA allocator: bucket (MCA v2.0, API v2.0, Component v1.4.3)
                MCA coll: basic (MCA v2.0, API v2.0, Component v1.4.3)
                MCA coll: hierarch (MCA v2.0, API v2.0, Component v1.4.3)
                MCA coll: inter (MCA v2.0, API v2.0, Component v1.4.3)
                MCA coll: self (MCA v2.0, API v2.0, Component v1.4.3)
                MCA coll: sm (MCA v2.0, API v2.0, Component v1.4.3)
                MCA coll: sync (MCA v2.0, API v2.0, Component v1.4.3)
                MCA coll: tuned (MCA v2.0, API v2.0, Component v1.4.3)
                  MCA io: romio (MCA v2.0, API v2.0, Component v1.4.3)
               MCA mpool: fake (MCA v2.0, API v2.0, Component v1.4.3)
               MCA mpool: rdma (MCA v2.0, API v2.0, Component v1.4.3)
               MCA mpool: sm (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA pml: cm (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA pml: csum (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA pml: ob1 (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA pml: v (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA bml: r2 (MCA v2.0, API v2.0, Component v1.4.3)
              MCA rcache: vma (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA btl: self (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA btl: sm (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA btl: tcp (MCA v2.0, API v2.0, Component v1.4.3)
                MCA topo: unity (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA osc: pt2pt (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA osc: rdma (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA iof: hnp (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA iof: orted (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA iof: tool (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA oob: tcp (MCA v2.0, API v2.0, Component v1.4.3)
                MCA odls: default (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA ras: slurm (MCA v2.0, API v2.0, Component v1.4.3)
               MCA rmaps: load_balance (MCA v2.0, API v2.0, Component v1.4.3)
               MCA rmaps: rank_file (MCA v2.0, API v2.0, Component v1.4.3)
               MCA rmaps: round_robin (MCA v2.0, API v2.0, Component v1.4.3)
               MCA rmaps: seq (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA rml: oob (MCA v2.0, API v2.0, Component v1.4.3)
              MCA routed: binomial (MCA v2.0, API v2.0, Component v1.4.3)
              MCA routed: direct (MCA v2.0, API v2.0, Component v1.4.3)
              MCA routed: linear (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA plm: rsh (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA plm: slurm (MCA v2.0, API v2.0, Component v1.4.3)
               MCA filem: rsh (MCA v2.0, API v2.0, Component v1.4.3)
              MCA errmgr: default (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA ess: env (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA ess: hnp (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA ess: singleton (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA ess: slurm (MCA v2.0, API v2.0, Component v1.4.3)
                 MCA ess: tool (MCA v2.0, API v2.0, Component v1.4.3)
             MCA grpcomm: bad (MCA v2.0, API v2.0, Component v1.4.3)
             MCA grpcomm: basic (MCA v2.0, API v2.0, Component v1.4.3)