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Subject: Re: [OMPI users] BUILDING OPENMPI ON UBUNTU WITH INTEL 11.1
From: Damien (damien_at_[hidden])
Date: 2011-05-03 15:59:45


That last error is because you don't have permission to install to /opt
as a regular user. You need to run that command as "sudo make install".

Damien

On 03/05/2011 1:55 PM, Steph Bredenhann wrote:
> I think you are a genius!
>
> The new result is attached, it was only the last step make install that
> looked suspect.
>
> I'll appreciate if you can look at these results?
>
> While I am at it, thank you a million times for making this available to the
> public! Without openmpi I would not have been able to complete my PhD!!!
>
> Thanks
>
> -----Original Message-----
> From: users-bounces_at_[hidden] [mailto:users-bounces_at_[hidden]] On
> Behalf Of Jeff Squyres
> Sent: Tuesday, May 03, 2011 21:27
> To: Open MPI Users
> Subject: Re: [OMPI users] BUILDING OPENMPI ON UBUNTU WITH INTEL 11.1
>
> Ah, I see why your output is munged -- there's a bunch of ^M's in there.
>
> It looks like OMPI's configure script got mucked up somehow. Did you expand
> the tarball on a windows machine and copy it over to a Linux box, perchance?
> If so, try expanding it directly on your Linux machine.
>
>
>
> On May 3, 2011, at 2:15 PM, Steph Bredenhann wrote:
>
>> Thanks for the speedy reply. The required file with information is
> attached.
>> I first thought I must send the file to openmpi again, sorry if that was
> wrong.
>> Thanks
>>
>>
>> --
>> Steph Bredenhann Pr.Eng Pr.CPM
>>
>>
>> Quoting Jeff Squyres<jsquyres_at_[hidden]>:
>>
>>> Your output appears jumbled. Can you send all the data listed here:
>>>
>>> http://www.open-mpi.org/community/help/
>>>
>>> On May 3, 2011, at 1:36 PM, Steph Bredenhann wrote:
>>>
>>>> Dear Sir/Madam
>>>>
>>>> I want to build openmpi for use with INTEL compilers (version 11.1)
>>>> on my
>>> Ubuntu
>>>> 10.10 x64 system. I am using the guidelines from
>>>>
>> http://software.intel.com/en-us/articles/performance-tools-for-softwar
>> e-developers-building-open-mpi-with-the-intel-compilers/
>>>> and specifically the following instructions:
>>>>
>>>>
>>>> ./configure --prefix=/usr/local CC=icc CXX=icpc F77=ifort FC=ifort
>>>> ... output of configure ...
>>>> make all install
>>>> ... output of build and installation ...
>>>>
>>>> The result is shown below. As can be seen it was unsuccessful. I'll
>>> appreciate
>>>> some guidance here as I am nearing the deadline for a project that
>>>> is part
>>> of
>>>> my research for my PhD.
>>>>
>>>> Thanks in advance.
>>>>
>>>> steph_at_sjb-linux:/src/openmpi-1.4.3$ ./configure
>>>> --prefix=/opt/openmpi-1.4.3 CC=icc CXX=icpc F77=ifort FC=ifort
>>>> checking for a BSD-compatible install... /usr/bin/install -c
>>>> checking whether build environment is sane... yes
>>>> : command not foundconfig/missing: line 3:
>>>> : command not foundconfig/missing: line 5:
>>>> : command not foundconfig/missing: line 9:
>>>> : command not foundconfig/missing: line 14:
>>>> : command not foundconfig/missing: line 19:
>>>> : command not foundconfig/missing: line 24:
>>>> : command not foundconfig/missing: line 29:
>>>> /src/openmpi-1.4.3/config/missing: line 49: syntax error near
>>>> unexpected
>>> token
>>>> `'n
>>>> 'src/openmpi-1.4.3/config/missing: line 49: `case $1 in
>>>> configure: WARNING: `missing' script is too old or missing checking
>>>> for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk...
>>>> gawk checking whether make sets $(MAKE)... yes checking how to
>>>> create a ustar tar archive... gnutar
>>>>
>>>>
>>> =====================================================================
>>> =======
>>>> == Configuring Open MPI
>>>>
>>> =====================================================================
>>> =======
>>>> *** Checking versions
>>>> : integer expression expected 3
>>>> : integer expression expected 0
>>>> .4ecking Open MPI version... 1
>>>> checking Open MPI release date... Oct 05, 2010 checking Open MPI
>>>> Subversion repository version... r23834
>>>> : integer expression expected 3
>>>> : integer expression expected 0
>>>> .4ecking Open Run-Time Environment version... 1 checking Open
>>>> Run-Time Environment release date... Oct 05, 2010 checking Open
>>>> Run-Time Environment Subversion repository version... r23834
>>>> : integer expression expected 3
>>>> : integer expression expected 0
>>>> .4ecking Open Portable Access Layer version... 1 checking Open
>>>> Portable Access Layer release date... Oct 05, 2010 checking Open
>>>> Portable Access Layer Subversion repository version... r23834
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>> : command not found
>>>>
>>>> *** Initialization, setup
>>>> configure: builddir: /src/openmpi-1.4.3
>>>> configure: srcdir: /src/openmpi-1.4.3
>>>> configure: error: cannot run /bin/sh config/config.sub
>>>> steph_at_sjb-linux:/src/openmpi-1.4.3$ make all install
>>>> make: *** No rule to make target `all'. Stop.
>>>> steph_at_sjb-linux:/src/openmpi-1.4.3$ make install
>>>> make: *** No rule to make target `install'. Stop.
>>>> steph_at_sjb-linux:/src/openmpi-1.4.3$
>>>>
>>>>
>>>> Regards
>>>>
>>>> Steph Bredenhann
>>>>
>>>>
>>>>
>>>>
>>>>
>>>>
>>>> --
>>>> This message was sent by Adept Internet's webmail.
>>>> http://www.adept.co.za/
>>>>
>>>> _______________________________________________
>>>> users mailing list
>>>> users_at_[hidden]
>>>> http://www.open-mpi.org/mailman/listinfo.cgi/users
>>>
>>> --
>>> Jeff Squyres
>>> jsquyres_at_[hidden]
>>> For corporate legal information go to:
>>> http://www.cisco.com/web/about/doing_business/legal/cri/
>>>
>>>
>>> _______________________________________________
>>> users mailing list
>>> users_at_[hidden]
>>> http://www.open-mpi.org/mailman/listinfo.cgi/users
>>>
>> --
>> This message was sent by Adept Internet's webmail.
>> http://www.adept.co.za/
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