If you have admin privileges on this system add library path to
eg: echo "/home/sunitap/soft/openmpi/lib" >> /etc/ld.so.conf
From: users-bounces_at_[hidden] [users-bounces_at_[hidden]] On Behalf Of sunita_at_[hidden] [sunita_at_[hidden]]
Sent: Monday, August 16, 2010 12:28 AM
To: Open MPI Users
Subject: Re: [OMPI users] problem with .bashrc stetting of openmpi
> hello Sunita,
> what linux distribution is this?
The linux distribution is Red Hat Enterprise Linux Server release 5.5
> On Fri, Aug 13, 2010 at 1:57 AM, <sunita_at_[hidden]> wrote:
>> Dear Open-mpi users,
>> I installed openmpi-1.4.1 in my user area and then set the path for
>> openmpi in the .bashrc file as follow. However, am still getting
>> error message whenever am starting the parallel molecular dynamics
>> simulation using GROMACS. So every time am starting the MD job, I need
>> source the .bashrc file again.
>> Earlier in some other machine I did the same thing and was not getting
>> Could you guys suggest what would be the problem?
>> #path for openmpi
>> export PATH=$PATH:/home/sunitap/soft/openmpi/bin
>> export CFLAGS="-I/home/sunitap/soft/openmpi/include"
>> export LDFLAGS="-L/home/sunitap/soft/openmpi/lib"
>> export LD_LIBRARY_PATH=/home/sunitap/soft/openmpi/lib:$LD_LIBRARY_PATH
>> ============== error message ==============
>> mdrun_mpi: error while loading shared libraries: libmpi.so.0: cannot
>> shared object file: No such file or directory
>> Thanks for any help.
>> Best regards,
>> users mailing list
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