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Subject: Re: [OMPI users] Running openMPI job with torque
From: Govind (govind.rhul_at_[hidden])
Date: 2010-06-09 11:37:53


#!/bin/sh
/usr/lib64/openmpi/1.4-gcc/bin/mpirun hello

On 9 June 2010 16:21, David Zhang <solarbikedz_at_[hidden]> wrote:

> what does your my-script.sh looks like?
>
> On Wed, Jun 9, 2010 at 8:17 AM, Govind <govind.rhul_at_[hidden]> wrote:
>
>> Hi,
>>
>> I have installed following openMPI packge on worker node from repo
>> openmpi-libs-1.4-4.el5.x86_64
>> openmpi-1.4-4.el5.x86_64
>> mpitests-openmpi-3.0-2.el5.x86_64
>> mpi-selector-1.0.2-1.el5.noarch
>>
>> torque-client-2.3.6-2cri.el5.x86_64
>> torque-2.3.6-2cri.el5.x86_64
>> torque-mom-2.3.6-2cri.el5.x86_64
>>
>>
>> Having some problem on running MPI jobs with torque
>> qsub -q long -l nodes=4 my-script.sh
>> 42.pbs1 <http://42.pbs1.pp.rhul.ac.uk/>
>>
>> cat my-script.sh.e41
>> stty: standard input: Invalid argument
>> --------------------------------------------------------------------------
>> mpirun was unable to launch the specified application as it could not find
>> an executable:
>>
>> Executable: hello
>> Node: node56.beowulf.cluster
>>
>> while attempting to start process rank 0.
>> ==================================
>>
>> I could run the binary directly on the node without any problem.
>> mpiexec -n 4 hello
>> Hello World! from process 2 out of 4 on node56.beowulf.cluster
>> Hello World! from process 0 out of 4 on node56.beowulf.cluster
>> Hello World! from process 3 out of 4 on node56.beowulf.cluster
>> Hello World! from process 1 out of 4 on node56.beowulf.cluster
>>
>> Could you please advise, if I missing anything here.
>>
>>
>> Regards
>> Govind
>>
>> _______________________________________________
>> users mailing list
>> users_at_[hidden]
>> http://www.open-mpi.org/mailman/listinfo.cgi/users
>>
>
>
>
> --
> David Zhang
> University of California, San Diego
>
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