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Subject: Re: [OMPI users] Configuring with torque: error and patch
From: Ralph Castain (rhc_at_[hidden])
Date: 2010-05-30 13:26:19


That's strange - haven't seen that on other Torque systems. How did you configure it?

On May 30, 2010, at 10:13 AM, John Cary wrote:

> Upon configuring and building openmpi on a system with
> torque, I repeatedly got build errors of the sort,
>
> /bin/sh ../../../libtool --tag=CXX --mode=link g++ -O3 -DNDEBUG -finline-functions -pthread -o ompi_info components.o ompi_info.o output.o param.o version.o ../../../ompi/libmpi.la -lnsl -lutil -lm
> libtool: link: g++ -O3 -DNDEBUG -finline-functions -pthread -o .libs/ompi_info components.o ompi_info.o output.o param.o version.o ../../../ompi/.libs/libmpi.so -L/usr/local/torque-2.4.0b1/lib /scr_multipole/cary/facetspkgs/builds/openmpi-1.4.2/nodl/orte/.libs/libopen-rte.so /scr_multipole/cary/facetspkgs/builds/openmpi-1.4.2/nodl/opal/.libs/libopen-pal.so -ldl -lnsl -lutil -lm -pthread -Wl,-rpath -Wl,/usr/local/contrib/openmpi-1.4.2-nodl/lib
> /scr_multipole/cary/facetspkgs/builds/openmpi-1.4.2/nodl/orte/.libs/libopen-rte.so: undefined reference to `tm_spawn'
> /scr_multipole/cary/facetspkgs/builds/openmpi-1.4.2/nodl/orte/.libs/libopen-rte.so: undefined reference to `tm_poll'
> /scr_multipole/cary/facetspkgs/builds/openmpi-1.4.2/nodl/orte/.libs/libopen-rte.so: undefined reference to `tm_finalize'
> /scr_multipole/cary/facetspkgs/builds/openmpi-1.4.2/nodl/orte/.libs/libopen-rte.so: undefined reference to `tm_init'
> collect2: ld returned 1 exit status
>
> which I fixed by adding one or the other of
>
> $(ORTE_WRAPPER_EXTRA_LDFLAGS) $(ORTE_WRAPPER_EXTRA_LIBS)
>
> $(OMPI_WRAPPER_EXTRA_LDFLAGS) $(OMPI_WRAPPER_EXTRA_LIBS)
>
> to various LDADD variables. I doubt that this is consistent
> with how your build system is designed, but it works for me.
> I am sending you the diff in case it helps you in any way.
> BTW, I also fixed some blanks after backslashes in
> contrib/Makefile.am. This is also in the attached patch.
>
> Best....John Cary
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