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Subject: Re: [OMPI users] torque pbs behaviour...
From: Ralph Castain (rhc_at_[hidden])
Date: 2009-08-10 21:44:15


Check your LD_LIBRARY_PATH - there is an earlier version of OMPI in
your path that is interfering with operation (i.e., it comes before
your 1.3.3 installation).

On Aug 10, 2009, at 7:38 PM, Klymak Jody wrote:

> So,
>
> mpirun --display-allocation -pernode --display-map hostname
>
> gives me the output below. Simple jobs seem to run, but the MITgcm
> does not, either under ssh or torque. It hangs at some early point
> in execution before anything is written, so its hard for me to tell
> what the error is. Could these MCA warnings have anything to do
> with it?
>
> I've recompiled the gcm with -L /usr/local/openmpi/lib, so hopefully
> that catches the right library.
>
> Thanks, Jody
>
>
> [xserve02.local:38126] mca: base: component_find: ras
> "mca_ras_dash_host" uses an MCA interface that is not recogniz
> ed (component MCA v1.0.0 != supported MCA v2.0.0) -- ignored
> [xserve02.local:38126] mca: base: component_find: ras
> "mca_ras_hostfile" uses an MCA interface that is not recognize
> d (component MCA v1.0.0 != supported MCA v2.0.0) -- ignored
> [xserve02.local:38126] mca: base: component_find: ras
> "mca_ras_localhost" uses an MCA interface that is not recogniz
> ed (component MCA v1.0.0 != supported MCA v2.0.0) -- ignored
> [xserve02.local:38126] mca: base: component_find: ras
> "mca_ras_xgrid" uses an MCA interface that is not recognized (
> component MCA v1.0.0 != supported MCA v2.0.0) -- ignored
> [xserve02.local:38126] mca: base: component_find: iof
> "mca_iof_proxy" uses an MCA interface that is not recognized (
> component MCA v1.0.0 != supported MCA v2.0.0) -- ignored
> [xserve02.local:38126] mca: base: component_find: iof "mca_iof_svc"
> uses an MCA interface that is not recognized (co
> mponent MCA v1.0.0 != supported MCA v2.0.0) -- ignored
>
> ====================== ALLOCATED NODES ======================
>
> Data for node: Name: xserve02.local Num slots: 8 Max slots: 0
> Data for node: Name: xserve01.local Num slots: 8 Max slots: 0
>
> =================================================================
>
> ======================== JOB MAP ========================
>
> Data for node: Name: xserve02.local Num procs: 1
> Process OMPI jobid: [20967,1] Process rank: 0
>
> Data for node: Name: xserve01.local Num procs: 1
> Process OMPI jobid: [20967,1] Process rank: 1
>
> =============================================================
> [xserve01.cluster:38518] mca: base: component_find: iof
> "mca_iof_proxy" uses an MCA interface that is not recognized
> (component MCA v1.0.0 != supported MCA v2.0.0) -- ignored
> [xserve01.cluster:38518] mca: base: component_find: iof
> "mca_iof_svc" uses an MCA interface that is not recognized (
> component MCA v1.0.0 != supported MCA v2.0.0) -- ignored
> xserve02.local
> xserve01.cluster
>
>
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