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Subject: Re: [OMPI users] torque pbs behaviour...
From: Klymak Jody (jklymak_at_[hidden])
Date: 2009-08-10 21:38:28


So,

mpirun --display-allocation -pernode --display-map hostname

gives me the output below. Simple jobs seem to run, but the MITgcm
does not, either under ssh or torque. It hangs at some early point in
execution before anything is written, so its hard for me to tell what
the error is. Could these MCA warnings have anything to do with it?

I've recompiled the gcm with -L /usr/local/openmpi/lib, so hopefully
that catches the right library.

Thanks, Jody

[xserve02.local:38126] mca: base: component_find: ras
"mca_ras_dash_host" uses an MCA interface that is not recogniz
ed (component MCA v1.0.0 != supported MCA v2.0.0) -- ignored
[xserve02.local:38126] mca: base: component_find: ras
"mca_ras_hostfile" uses an MCA interface that is not recognize
d (component MCA v1.0.0 != supported MCA v2.0.0) -- ignored
[xserve02.local:38126] mca: base: component_find: ras
"mca_ras_localhost" uses an MCA interface that is not recogniz
ed (component MCA v1.0.0 != supported MCA v2.0.0) -- ignored
[xserve02.local:38126] mca: base: component_find: ras "mca_ras_xgrid"
uses an MCA interface that is not recognized (
component MCA v1.0.0 != supported MCA v2.0.0) -- ignored
[xserve02.local:38126] mca: base: component_find: iof "mca_iof_proxy"
uses an MCA interface that is not recognized (
component MCA v1.0.0 != supported MCA v2.0.0) -- ignored
[xserve02.local:38126] mca: base: component_find: iof "mca_iof_svc"
uses an MCA interface that is not recognized (co
mponent MCA v1.0.0 != supported MCA v2.0.0) -- ignored

====================== ALLOCATED NODES ======================

  Data for node: Name: xserve02.local Num slots: 8 Max slots: 0
  Data for node: Name: xserve01.local Num slots: 8 Max slots: 0

=================================================================

  ======================== JOB MAP ========================

  Data for node: Name: xserve02.local Num procs: 1
         Process OMPI jobid: [20967,1] Process rank: 0

  Data for node: Name: xserve01.local Num procs: 1
         Process OMPI jobid: [20967,1] Process rank: 1

  =============================================================
[xserve01.cluster:38518] mca: base: component_find: iof
"mca_iof_proxy" uses an MCA interface that is not recognized
  (component MCA v1.0.0 != supported MCA v2.0.0) -- ignored
[xserve01.cluster:38518] mca: base: component_find: iof "mca_iof_svc"
uses an MCA interface that is not recognized (
component MCA v1.0.0 != supported MCA v2.0.0) -- ignored
xserve02.local
xserve01.cluster