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Subject: Re: [OMPI users] compiling from source from svn
From: Jeff Squyres (jsquyres_at_[hidden])
Date: 2008-05-16 12:02:34


Hmm. I just committed this feature to the trunk the other day. Could
you perchance have gotten an intermediate r number that didn't want to
compile? :-(

What r number did you get?

FWIW, my SVN HEAD compiles fine today: r18448.

On May 16, 2008, at 10:17 AM, Karsten Bolding wrote:

> Hello
>
> Due to a new feature - direct mapping between machinefile and rank - I
> want to try out the svn version. However, I run into compilation
> probloms. Here is what I do after I've updated svn.
>
> kb_at_gate:/data/kb/compile/openmpi-svn$ ./autogen.sh
> kb_at_gate:/data/kb/compile/openmpi-svn$ mkdir build
> kb_at_gate:/data/kb/compile/openmpi-svn$ cd build
> kb_at_gate:/data/kb/compile/openmpi-svn/build$ ../configure
> --prefix=/opt/openmpi-svn/ F77=ifort F90=ifort
> kb_at_gate:/data/kb/compile/openmpi-svn/build$ make
>
> lots of compilation is going on - and then
>
> make[2]: Entering directory
> `/data/kb/compile/openmpi-svn/build/orte/tools/orted'
> depbase=`echo orted.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> gcc -DHAVE_CONFIG_H -I. -I../../../../orte/tools/orted
> -I../../../opal/include -I../../../orte/include -I../../../ompi/
> include
> -I../../../opal/mca/paffinity/linux/plpa/src/libplpa -I../../../..
> -I../../.. -I../../../../opal/include -I../../../../orte/include
> -I../../../../ompi/include -O3 -DNDEBUG -finline-functions
> -fno-strict-aliasing -pthread -fvisibility=hidden -MT orted.o -MD -MP
> -MF $depbase.Tpo -c -o orted.o ../../../../orte/tools/orted/orted.c
> &&\
> mv -f $depbase.Tpo $depbase.Po
> /bin/sh ../../../libtool --tag=CC --mode=link gcc -O3 -DNDEBUG
> -finline-functions -fno-strict-aliasing -pthread -fvisibility=hidden
> -export-dynamic -o orted orted.o ../../../orte/libopen-rte.la -lnsl
> -lutil -lm
> mkdir .libs
> gcc -O3 -DNDEBUG -finline-functions -fno-strict-aliasing -pthread
> -fvisibility=hidden -o .libs/orted orted.o -Wl,--export-dynamic
> ../../../orte/.libs/libopen-rte.so -lnsl -lutil -lm -Wl,--rpath
> -Wl,/opt/openmpi-svn//lib
> ../../../orte/.libs/libopen-rte.so: undefined reference to
> `mca_base_select'
> ../../../orte/.libs/libopen-rte.so: undefined reference to
> `opal_output_vverbose'
> ../../../orte/.libs/libopen-rte.so: undefined reference to
> `opal_output_vstring'
> ../../../orte/.libs/libopen-rte.so: undefined reference to
> `opal_tmp_directory'
> ../../../orte/.libs/libopen-rte.so: undefined reference to
> `opal_show_help_vstring'
> ../../../orte/.libs/libopen-rte.so: undefined reference to
> `opal_filter'
> ../../../orte/.libs/libopen-rte.so: undefined reference to
> `opal_home_directory'
> ../../../orte/.libs/libopen-rte.so: undefined reference to
> `opal_arch_compute_local_id'
> collect2: ld returned 1 exit status
> make[2]: *** [orted] Error 1
> make[2]: Leaving directory
> `/data/kb/compile/openmpi-svn/build/orte/tools/orted'
> make[1]: *** [all-recursive] Error 1
> make[1]: Leaving directory `/data/kb/compile/openmpi-svn/build/orte'
> make: *** [all-recursive] Error 1
>
> The shared library libopen-rte.so does not seem to exist at all.
>
>
> Karsten
>
> --
> ----------------------------------------------------------------------
> Karsten Bolding Bolding & Burchard ApS
> Strandgyden 25 Phone: +45 64422058
> DK-5466 Asperup Fax: +45 64422068
> Denmark Email: karsten_at_[hidden]
>
> http://www.findvej.dk/Strandgyden25,5466,11,3
> ----------------------------------------------------------------------
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-- 
Jeff Squyres
Cisco Systems