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From: Tim Prins (tprins_at_[hidden])
Date: 2007-10-22 21:06:23


Hi Ides,

Thanks for the report and reminder. I have filed a ticket on this
(https://svn.open-mpi.org/trac/ompi/ticket/1173) and you should receive email
as it is updated.

I do not know of any more elegant way to work around this at the moment.

Thanks,

Tim

On Friday 19 October 2007 06:31:53 am idesbald van den bosch wrote:
> Hi,
>
> I've run into the same problem as discussed in the thread Lev Gelb: "Re:
> [OMPI users] Recursive use of "orterun" (Ralph H
> Castain)"<http://www.open-mpi.org/community/lists/users/2007/07/3655.php>
>
> I am running a parallel python code, then from python I launch a C++
> parallel program using the python os.system command, then I come back in
> python and keep going.
>
> With LAM/MPI there is no problem with this.
>
> But Open-mpi systematically crashes, because the python os.system command
> launches the C++ program with the same OMPI_* environment variables as for
> the Python program. As discussed in the thread, I have tried filtering the
> OMPI_* variables prior to launching the C++ program with an
> os.execvecommand, but then it fails to return the hand to python and
> instead simply
> terminates when the C++ program ends.
>
> There is a workaround (
> http://thread.gmane.org/gmane.comp.clustering.open-mpi.user/986): create a
> *.sh file with the following lines:
>
> --------
> for i in $(env | grep OMPI_MCA |sed 's/=/ /' | awk '{print $1}')
> do
> unset $i
> done
>
> # now the C++ call
> mpirun -np 2 ./MoM/communicateMeshArrays
> ----------
>
> and then call the *.sh program through the python os.system command.
>
> What I would like to know is that if this "problem" will get fixed in
> open-MPI? Is there another way to elegantly solve this issue? Meanwhile, I
> will stick to the ugly *.sh hack listed above.
>
> Cheers
>
> Ides