On 4/30/08, Mukesh K Srivastava <srimks11@gmail.com> wrote:
Hi.
I am using IMB-3.1, an Intel MPI Benchmark tool with OpenMPI(v-1.2.5). In /IMB-3.1/src/make_mpich file, I had only given the decalartion for MPI_HOME, which takes care for CC, OPTFLAGS & CLINKER. Building IMB_MPI1, IMP-EXT & IMB-IO happens succesfully.
I get proper results of IMB Benchmark with command "-np 1" as mpirun IMB-MPI1, but for "-np 2", I get below errors -
-----
[mukesh@n161 src]$ mpirun -np 2 IMB-MPI1
[n161:13390] *** Process received signal ***
[n161:13390] Signal: Segmentation fault (11)
[n161:13390] Signal code: Address not mapped (1)
[n161:13390] Failing at address: (nil)
[n161:13390] [ 0] /lib64/tls/libpthread.so.0 [0x399e80c4f0]
[n161:13390] [ 1] /home/mukesh/openmpi/prefix/lib/openmpi/mca_btl_sm.so [0x2a9830f8b4]
[n161:13390] [ 2] /home/mukesh/openmpi/prefix/lib/openmpi/mca_btl_sm.so [0x2a983109e3]
[n161:13390] [ 3] /home/mukesh/openmpi/prefix/lib/openmpi/mca_btl_sm.so(mca_btl_sm_component_progress+0xbc) [0x2a9830fc50]
[n161:13390] [ 4] /home/mukesh/openmpi/prefix/lib/openmpi/mca_bml_r2.so(mca_bml_r2_progress+0x4b) [0x2a97fce447]
[n161:13390] [ 5] /home/mukesh/openmpi/prefix/lib/libopen-pal.so.0(opal_progress+0xbc) [0x2a958fc343]
[n161:13390] [ 6] /home/mukesh/openmpi/prefix/lib/openmpi/mca_oob_tcp.so(mca_oob_tcp_msg_wait+0x22) [0x2a962e9e22]
[n161:13390] [ 7] /home/mukesh/openmpi/prefix/lib/openmpi/mca_oob_tcp.so(mca_oob_tcp_recv+0x677) [0x2a962f1aab]
[n161:13390] [ 8] /home/mukesh/openmpi/prefix/lib/libopen-rte.so.0(mca_oob_recv_packed+0x46) [0x2a9579d243]
[n161:13390] [ 9] /home/mukesh/openmpi/prefix/lib/openmpi/mca_gpr_proxy.so(orte_gpr_proxy_put+0x2f3) [0x2a96508c8f]
[n161:13390] [10] /home/mukesh/openmpi/prefix/lib/libopen-rte.so.0(orte_smr_base_set_proc_state+0x425) [0x2a957c391d]
[n161:13390] [11] /home/mukesh/openmpi/prefix/lib/libmpi.so.0(ompi_mpi_init+0xa1e) [0x2a9559f042]
[n161:13390] [12] /home/mukesh/openmpi/prefix/lib/libmpi.so.0(PMPI_Init_thread+0xcb) [0x2a955e1c5b]
[n161:13390] [13] IMB-MPI1(main+0x33) [0x403543]
[n161:13390] [14] /lib64/tls/libc.so.6(__libc_start_main+0xdb) [0x399e11c3fb]
[n161:13390] [15] IMB-MPI1 [0x40347a]
[n161:13390] *** End of error message ***
[n161:13391] *** Process received signal ***
[n161:13391] Signal: Segmentation fault (11)
[n161:13391] Signal code: Address not mapped (1)
[n161:13391] Failing at address: (nil)
[n161:13391] [ 0] /lib64/tls/libpthread.so.0 [0x399e80c4f0]
[n161:13391] [ 1] /home/mukesh/openmpi/prefix/lib/openmpi/mca_btl_sm.so [0x2a9830f8b4]
[n161:13391] [ 2] /home/mukesh/openmpi/prefix/lib/openmpi/mca_btl_sm.so [0x2a983109e3]
[n161:13391] [ 3] /home/mukesh/openmpi/prefix/lib/openmpi/mca_btl_sm.so(mca_btl_sm_component_progress+0xbc) [0x2a9830fc50]
[n161:13391] [ 4] /home/mukesh/openmpi/prefix/lib/openmpi/mca_bml_r2.so(mca_bml_r2_progress+0x4b) [0x2a97fce447]
[n161:13391] [ 5] /home/mukesh/openmpi/prefix/lib/libopen-pal.so.0(opal_progress+0xbc) [0x2a958fc343]
[n161:13391] [ 6] /home/mukesh/openmpi/prefix/lib/openmpi/mca_oob_tcp.so(mca_oob_tcp_msg_wait+0x22) [0x2a962e9e22]
[n161:13391] [ 7] /home/mukesh/openmpi/prefix/lib/openmpi/mca_oob_tcp.so(mca_oob_tcp_recv+0x677) [0x2a962f1aab]
[n161:13391] [ 8] /home/mukesh/openmpi/prefix/lib/libopen-rte.so.0(mca_oob_recv_packed+0x46) [0x2a9579d243]
[n161:13391] [ 9] /home/mukesh/openmpi/prefix/lib/libopen-rte.so.0 [0x2a9579e910]
[n161:13391] [10] /home/mukesh/openmpi/prefix/lib/libopen-rte.so.0(mca_oob_xcast+0x140) [0x2a9579d824]
[n161:13391] [11] /home/mukesh/openmpi/prefix/lib/libmpi.so.0(ompi_mpi_init+0xaf1) [0x2a9559f115]
[n161:13391] [12] /home/mukesh/openmpi/prefix/lib/libmpi.so.0(PMPI_Init_thread+0xcb) [0x2a955e1c5b]
[n161:13391] [13] IMB-MPI1(main+0x33) [0x403543]
[n161:13391] [14] /lib64/tls/libc.so.6(__libc_start_main+0xdb) [0x399e11c3fb]
[n161:13391] [15] IMB-MPI1 [0x40347a]
[n161:13391] *** End of error message ***
-----
Query#1: Any clue for above?
It worked for me.
1. maybe mpirun belongs to another MPI.
2. try to define hosts ( -H host1,host2 )
Query#2: How can I include seperate exe file and have the IMB for it, e.g, writing a hello.c with MPI elementary API calls, compiling with mpicc and performing IMB for the same exe.?
you have all the sorces
maybe in IMB's README you can find something
Best Regards,
Lenny
BR
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