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Subject: Re: [OMPI devel] v1.7.5a1: mpirun failure on ppc/linux (regression vs 1.7.4)
From: Mike Dubman (miked_at_[hidden])
Date: 2014-02-09 09:21:17


Hi,
we get same crash with gcc and x86_64.

On Sun, Feb 9, 2014 at 10:32 AM, Paul Hargrove <phhargrove_at_[hidden]> wrote:

> I have tried building the current v1.7 tarball (1.7.5a1r30639) with gcc on
> two ppc64/linux machines and one ppc32/linux. All three die in MPI_Init
> when I try to run ring_c.
>
> I've retested 1.7.4 on both ppc64 machines, and thankfully the problem is
> not present.
>
>
> Each of them at least dies with what looks like a potentially useful
> backtrace:
>
> $ mpirun -mca btl sm,self -np 2 examples/ring_c
> *** glibc detected *** examples/ring_c: double free or corruption
> (fasttop): 0x000001003f1d5ce0 ***
> ======= Backtrace: =========
> /lib64/libc.so.6[0x80c9b8f4f4]
>
> /home/hargrov1/OMPI/openmpi-1.7-latest-linux-ppc64-gcc/INST/lib/libmpi.so.1(mca_btl_sm_add_procs-0x2db2c8)[0xfffa29e59a8]
>
> /home/hargrov1/OMPI/openmpi-1.7-latest-linux-ppc64-gcc/INST/lib/libmpi.so.1(+0x2311bc)[0xfffa29711bc]
>
> /home/hargrov1/OMPI/openmpi-1.7-latest-linux-ppc64-gcc/INST/lib/libmpi.so.1(mca_pml_ob1_add_procs-0x14f514)[0xfffa2b7df3c]
>
> /home/hargrov1/OMPI/openmpi-1.7-latest-linux-ppc64-gcc/INST/lib/libmpi.so.1(ompi_mpi_init-0x421ff0)[0xfffa28911f0]
>
> /home/hargrov1/OMPI/openmpi-1.7-latest-linux-ppc64-gcc/INST/lib/libmpi.so.1(MPI_Init-0x3d7120)[0xfffa28df670]
> examples/ring_c[0x100009ac]
> /lib64/libc.so.6[0x80c9b2bcd8]
> /lib64/libc.so.6(__libc_start_main-0x184e00)[0x80c9b2bed0]
> [bd-login:51140] WARNING: common_sm_module_unlink failed.
> [bd-login:51140] WARNING: common_sm_module_unlink failed.
> [bd-login:51140] WARNING: unlink failed.
> [bd-login:51140] WARNING: unlink failed.
> [bd-login:51141] *** Process received signal ***
> [bd-login:51141] Signal: Aborted (6)
> [bd-login:51141] Signal code: (-6)
> [bd-login:51141] [ 0] [0xfffa2da0418]
> [bd-login:51141] [ 1] /lib64/libc.so.6(abort-0x16b278)[0x80c9b46ed8]
> [bd-login:51141] [ 2] /lib64/libc.so.6[0x80c9b87568]
> [bd-login:51141] [ 3] /lib64/libc.so.6[0x80c9b8f4f4]
> [bd-login:51141] [ 4]
> /home/hargrov1/OMPI/openmpi-1.7-latest-linux-ppc64-gcc/INST/lib/libmpi.so.1(mca_btl_sm_add_procs-0x2db2c8)[0xfffa29e59a8]
> [bd-login:51141] [ 5]
> /home/hargrov1/OMPI/openmpi-1.7-latest-linux-ppc64-gcc/INST/lib/libmpi.so.1(+0x2311bc)[0xfffa29711bc]
> [bd-login:51141] [ 6]
> /home/hargrov1/OMPI/openmpi-1.7-latest-linux-ppc64-gcc/INST/lib/libmpi.so.1(mca_pml_ob1_add_procs-0x14f514)[0xfffa2b7df3c]
> [bd-login:51141] [ 7]
> /home/hargrov1/OMPI/openmpi-1.7-latest-linux-ppc64-gcc/INST/lib/libmpi.so.1(ompi_mpi_init-0x421ff0)[0xfffa28911f0]
> [bd-login:51141] [ 8]
> /home/hargrov1/OMPI/openmpi-1.7-latest-linux-ppc64-gcc/INST/lib/libmpi.so.1(MPI_Init-0x3d7120)[0xfffa28df670]
> [bd-login:51141] [ 9] examples/ring_c[0x100009ac]
> [bd-login:51141] [10] /lib64/libc.so.6[0x80c9b2bcd8]
> [bd-login:51141] [11]
> /lib64/libc.so.6(__libc_start_main-0x184e00)[0x80c9b2bed0]
> [bd-login:51141] *** End of error message ***
>
> $ mpirun -mca btl sm,self -np 2 examples/ring_c
> [fc6:27829] *** Process received signal ***
> [fc6:27829] Signal: Segmentation fault (11)
> [fc6:27829] Signal code: Address not mapped (1)
> [fc6:27829] Failing at address: 0x805aa7c9e0
> [fc6:27829] [ 0] [0x100428]
> [fc6:27829] [ 1] /lib64/ld64.so.1(_rtld_global+0x0)[0x804a7d19b8]
> [fc6:27829] [ 2] /lib64/libc.so.6[0x804a888f34]
> [fc6:27829] [ 3] /lib64/libc.so.6(__libc_malloc-0xf95c4)[0x804a88aab4]
> [fc6:27829] [ 4]
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc64/INST/lib/libmpi.so.1(mca_pml_ob1_comm_init_size-0x124550)[0x40000393078]
> [fc6:27829] [ 5]
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc64/INST/lib/libmpi.so.1(mca_pml_ob1_add_comm-0x1276dc)[0x4000038fc1c]
> [fc6:27829] [ 6]
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc64/INST/lib/libmpi.so.1(ompi_mpi_init-0x36fb38)[0x40000130c30]
> [fc6:27829] [ 7]
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc64/INST/lib/libmpi.so.1(MPI_Init-0x3289fc)[0x4000017b34c]
> [fc6:27829] [ 8] examples/ring_c[0x100009b0]
> [fc6:27829] [ 9] /lib64/libc.so.6[0x804a829734]
> [fc6:27829] [10] /lib64/libc.so.6(__libc_start_main-0x15730c)[0x804a8299b4]
> [fc6:27829] *** End of error message ***
>
> $ mpirun -mca btl sm,self -np 2 examples/ring_c
> *** glibc detected *** examples/ring_c: double free or corruption (!prev):
> 0x101b5560 ***
> ======= Backtrace: =========
> /lib/libc.so.6(+0xfe74dd4)[0x480d0dd4]
>
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc32/INST/lib/libmpi.so.1(mca_btl_sm_add_procs+0x66c)[0xfc720c0]
>
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc32/INST/lib/libmpi.so.1(+0x15f7a0)[0xfc5e7a0]
>
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc32/INST/lib/libmpi.so.1(mca_pml_ob1_add_procs+0x14c)[0xfdecc50]
>
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc32/INST/lib/libmpi.so.1(ompi_mpi_init+0xcec)[0xfb96eb4]
>
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc32/INST/lib/libmpi.so.1(MPI_Init+0x1e4)[0xfbdd878]
> examples/ring_c[0x10000724]
> /lib/libc.so.6(+0xfe0e0fc)[0x4806a0fc]
> /lib/libc.so.6(+0xfe0e2a0)[0x4806a2a0]
> [pcp-k-421:02574] *** Process received signal ***
> [pcp-k-421:02574] Signal: Aborted (6)
> [pcp-k-421:02574] Signal code: (-6)
> [pcp-k-421:02574] [ 0] [0x100370]
> [pcp-k-421:02574] [ 1] [0xbfd3a008]
> [pcp-k-421:02574] [ 2] /lib/libc.so.6(abort+0x25c)[0x48084a2c]
> [pcp-k-421:02574] [ 3] /lib/libc.so.6(+0xfe6cc9c)[0x480c8c9c]
> [pcp-k-421:02574] [ 4] /lib/libc.so.6(+0xfe74dd4)[0x480d0dd4]
> [pcp-k-421:02574] [ 5]
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc32/INST/lib/libmpi.so.1(mca_btl_sm_add_
> procs+0x66c)[0xfc720c0]
> [pcp-k-421:02574] [ 6]
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc32/INST/lib/libmpi.so.1(+0x15f7a0)[0xfc5e7a0]
> [pcp-k-421:02574] [ 7]
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc32/INST/lib/libmpi.so.1(mca_pml_ob1_add_procs+0x14c)[0xfdecc50]
>
> [pcp-k-421:02574] [ 8]
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc32/INST/lib/libmpi.so.1(ompi_mpi_init+0xcec)[0xfb96eb4]
> [pcp-k-421:02574] [ 9]
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc32/INST/lib/libmpi.so.1(MPI_Init+0x1e4)[0xfbdd878]
> [pcp-k-421:02574] [10] examples/ring_c[0x10000724]
> [pcp-k-421:02574] [11] /lib/libc.so.6(+0xfe0e0fc)[0x4806a0fc]
> [pcp-k-421.n2001:02573] WARNING: common_sm_module_unlink failed.
> [pcp-k-421:02574] [12] /lib/libc.so.6(+0xfe0e2a0)[0x4806a2a0]
> [pcp-k-421:02574] *** End of error message ***
> [pcp-k-421.n2001:02573] WARNING: common_sm_module_unlink failed.
> [pcp-k-421.n2001:02573] WARNING: unlink failed.
> [pcp-k-421.n2001:02573] WARNING: A system call failed during shared memory
> initialization that should unlink failed.
> [pcp-k-421:02573] *** Process received signal ***
> [pcp-k-421:02573] Signal: Segmentation fault (11)
> [pcp-k-421:02573] Signal code: Address not mapped (1)
> [pcp-k-421:02573] Failing at address: 0x3f000008
> [pcp-k-421:02573] [ 0] [0x100370]
> [pcp-k-421:02573] [ 1] [0xffffffff]
> [pcp-k-421:02573] [ 2] /lib/libc.so.6(__libc_malloc+0x8c)[0x480d525c]
> [pcp-k-421:02573] [ 3]
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc32/INST/lib/libmpi.so.1(+0x2eb7f8)[0xfdea7f8]
> [pcp-k-421:02573] [ 4]
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc32/INST/lib/libmpi.so.1(+0x2eb5a0)[0xfdea5a0]
> [pcp-k-421:02573] [ 5]
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc32/INST/lib/libmpi.so.1(mca_pml_ob1_add_comm+0x40)[0xfdec108]
> [pcp-k-421:02573] [ 6]
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc32/INST/lib/libmpi.so.1(ompi_mpi_init+0xd6c)[0xfb96f34]
> [pcp-k-421:02573] [ 7]
> /home/phargrov/OMPI/openmpi-1.7-latest-linux-ppc32/INST/lib/libmpi.so.1(MPI_Init+0x1e4)[0xfbdd878]
> [pcp-k-421:02573] [ 8] examples/ring_c[0x10000724]
> [pcp-k-421:02573] [ 9] /lib/libc.so.6(+0xfe0e0fc)[0x4806a0fc]
> [pcp-k-421:02573] [10] /lib/libc.so.6(+0xfe0e2a0)[0x4806a2a0]
> [pcp-k-421:02573] *** End of error message ***
> --------------------------------------------------------------------------
> mpirun noticed that process rank 1 with PID 2574 on node pcp-k-421 exited
> on signal 6 (Aborted).
> --------------------------------------------------------------------------
>
> -Paul
>
> --
> Paul H. Hargrove PHHargrove_at_[hidden]
> Future Technologies Group
> Computer and Data Sciences Department Tel: +1-510-495-2352
> Lawrence Berkeley National Laboratory Fax: +1-510-486-6900
>
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