Open MPI logo

Open MPI Development Mailing List Archives

  |   Home   |   Support   |   FAQ   |   all Development mailing list

Subject: Re: [OMPI devel] VT compile error: Fwd: [ofa-general] OFED1.4.1 (rc1) is available
From: Jeff Squyres (jsquyres_at_[hidden])
Date: 2009-03-09 17:54:43


Thanks; I added that do the OpenFabrics bug (it wouldn't even let me
add you as a CC; sigh).

On Mar 9, 2009, at 3:59 AM, Matthias Jurenz wrote:

> Unfortunately, I have no write access to the OFED bugzilla, so I
> answer
> to the OMPI devel list...
>
>
> It sounds like the following issue that we had early January:
>
> http://www.open-mpi.org/community/lists/devel/2009/01/5102.php
>
> The bottom line was that we don't know what's wrong.
> However, there are these workarounds to solve this problem:
>
> - setting 'use_default_rpm_opt_flags' to 0
> - adding configure option '--with-contrib-vt-flags=--disable-iotrace'
>
>
> Matthias
>
> On Thu, 2009-03-05 at 16:43 +0200, Pavel Shamis (Pasha) wrote:
> > Adding pointer to OFED bugzilla ticket for more information:
> > https://bugs.openfabrics.org/show_bug.cgi?id=1537
> >
> > Jeff Squyres wrote:
> > > VT guys --
> > >
> > > It looks like we still have a compile bug in OMPI 1.3.1rc4...
> See below.
> > >
> > > Do you think you can get a fix ASAP for OMPI 1.3.1final?
> > >
> > >
> > > Begin forwarded message:
> > >
> > >> *From: *"PN" <poknam_at_[hidden] <mailto:poknam_at_[hidden]>>
> > >> *Date: *March 5, 2009 12:51:28 AM EST
> > >> *To: *"Tziporet Koren" <tziporet_at_[hidden]
> > >> <mailto:tziporet_at_[hidden]>>
> > >> *Cc: *<ewg_at_[hidden] <mailto:ewg_at_[hidden]
> >>,
> > >> <general_at_[hidden] <mailto:general_at_[hidden]
> >>
> > >> *Subject:** Re: [ofa-general] OFED 1.4.1 is available*
> > >>
> > >> HI,
> > >>
> > >> I have a build error of OFED-1.4.1-rc1 under CentOS 5.2:
> > >>
> > >> .....
> > >> Build openmpi_gcc RPM
> > >> Running rpmbuild --rebuild --define '_topdir /var/tmp/
> OFED_topdir'
> > >> --define 'dist %{nil}' --target x86_64 --define '_name
> openmpi_gcc'
> > >> --define 'mpi_selector /usr/bin/mpi-selector' --define
> > >> 'use_mpi_selector 1' --define 'install_shell_scripts 1' --define
> > >> 'shell_scripts_basename mpivars' --define '_usr /usr' --define
> 'ofed
> > >> 0' --define '_prefix /usr/mpi/gcc/openmpi-1.3.1rc4' --define
> > >> '_defaultdocdir /usr/mpi/gcc/openmpi-1.3.1rc4' --define '_mandir
> > >> %{_prefix}/share/man' --define 'mflags -j 4' --define
> > >> 'configure_options --with-openib=/usr
> > >> --with-openib-libdir=/usr/lib64 CC=gcc CXX=g++ F77=gfortran
> > >> FC=gfortran --enable-mpirun-prefix-by-default' --define
> > >> 'use_default_rpm_opt_flags 1'
> > >> /opt/software/packages/ofed/OFED-1.4.1-rc1/OFED-1.4.1-rc1/SRPMS/
> openmpi-1.3.1rc4-1.src.rpm
> > >> Failed to build openmpi RPM
> > >> See /tmp/OFED.28377.logs/openmpi.rpmbuild.log
> > >>
> > >>
> > >> In /tmp/OFED.28377.logs/openmpi.rpmbuild.log:
> > >> .....
> > >> gcc -DHAVE_CONFIG_H -I. -I.. -I../tools/opari/lib
> > >> -I../extlib/otf/otflib -I../extlib/otf/otflib -D_GNU_SOURCE
> > >> -DBINDIR=\"/usr/mpi/gcc/openmpi-1.3.1rc4/bin\"
> > >> -DDATADIR=\"/usr/mpi/gcc/openmpi-1.3.1rc4/share\" -DRFG -
> DVT_MEMHOOK
> > >> -DVT_IOWRAP -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -
> fexceptions
> > >> -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic
> -MT
> > >> vt_iowrap_helper.o -MD -MP -MF .deps/vt_iowrap_helper.Tpo -c -o
> > >> vt_iowrap_helper.o vt_iowrap_helper.c
> > >> mv -f .deps/vt_memhook.Tpo .deps/vt_memhook.Po
> > >> gcc -DHAVE_CONFIG_H -I. -I.. -I../tools/opari/lib
> > >> -I../extlib/otf/otflib -I../extlib/otf/otflib -D_GNU_SOURCE
> > >> -DBINDIR=\"/usr/mpi/gcc/openmpi-1.3.1rc4/bin\"
> > >> -DDATADIR=\"/usr/mpi/gcc/openmpi-1.3.1rc4/share\" -DRFG -
> DVT_MEMHOOK
> > >> -DVT_IOWRAP -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -
> fexceptions
> > >> -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic
> -MT
> > >> rfg_regions.o -MD -MP -MF .deps/rfg_regions.Tpo -c -o
> rfg_regions.o
> > >> rfg_regions.c
> > >> vt_iowrap.c:1242: error: expected declaration specifiers or '...'
> > >> before numeric constant
> > >> vt_iowrap.c:1243: error: conflicting types for '__fprintf_chk'
> > >> mv -f .deps/vt_iowrap_helper.Tpo .deps/vt_iowrap_helper.Po
> > >> make[5]: *** [vt_iowrap.o] Error 1
> > >> make[5]: *** Waiting for unfinished jobs....
> > >> mv -f .deps/vt_comp_gnu.Tpo .deps/vt_comp_gnu.Po
> > >> mv -f .deps/rfg_regions.Tpo .deps/rfg_regions.Po
> > >> make[5]: Leaving directory
> > >> `/var/tmp/OFED_topdir/BUILD/openmpi-1.3.1rc4/ompi/contrib/vt/vt/
> vtlib'
> > >> make[4]: *** [all-recursive] Error 1
> > >> make[4]: Leaving directory
> > >> `/var/tmp/OFED_topdir/BUILD/openmpi-1.3.1rc4/ompi/contrib/vt/vt'
> > >> make[3]: *** [all] Error 2
> > >> make[3]: Leaving directory
> > >> `/var/tmp/OFED_topdir/BUILD/openmpi-1.3.1rc4/ompi/contrib/vt/vt'
> > >> make[2]: *** [all-recursive] Error 1
> > >> make[2]: Leaving directory
> > >> `/var/tmp/OFED_topdir/BUILD/openmpi-1.3.1rc4/ompi/contrib/vt'
> > >> make[1]: *** [all-recursive] Error 1
> > >> make[1]: Leaving directory
> > >> `/var/tmp/OFED_topdir/BUILD/openmpi-1.3.1rc4/ompi'
> > >> make: *** [all-recursive] Error 1
> > >> error: Bad exit status from /var/tmp/rpm-tmp.40739 (%build)
> > >>
> > >>
> > >> RPM build errors:
> > >> user jsquyres does not exist - using root
> > >> group eng10 does not exist - using root
> > >> user jsquyres does not exist - using root
> > >> group eng10 does not exist - using root
> > >> Bad exit status from /var/tmp/rpm-tmp.40739 (%build)
> > >>
> > >>
> > >> The error seems similar to
> > >> http://www.open-mpi.org/community/lists/devel/2009/01/5230.php
> > >>
> > >> Regards,
> > >> PN
> > >>
> > >>
> > >> 2009/3/5 Tziporet Koren <tziporet_at_[hidden]
> > >> <mailto:tziporet_at_[hidden]>>
> > >>
> > >> Hi,
> > >>
> > >> OFED-1.4.1-rc1 release is available on
> > >>
> > >> _http://www.openfabrics.org/downloads/OFED/ofed-1.4.1/OFED-1.4.1-rc1.tgz_
> > >>
> > >>
> > >> To get BUILD_ID run ofed_info
> > >>
> > >> Please report any issues in bugzilla
> > >> _https://bugs.openfabrics.org/_ for OFED 1.4.1
> > >>
> > >> Vladimir & Tziporet
> > >>
> > >>
> =
> =
> ======================================================================
> > >>
> > >>
> > >> Release information:
> > >>
> > >> ------------------------------
> > >>
> > >> Linux Operating Systems:
> > >>
> > >> - RedHat EL4 up4: 2.6.9-42.ELsmp *
> > >>
> > >> - RedHat EL4 up5: 2.6.9-55.ELsmp
> > >>
> > >> - RedHat EL4 up6: 2.6.9-67.ELsmp
> > >>
> > >> - RedHat EL4 up7: 2.6.9-78.ELsmp
> > >>
> > >> - RedHat EL5: 2.6.18-8.el5
> > >>
> > >> - RedHat EL5 up1: 2.6.18-53.el5
> > >>
> > >> - RedHat EL5 up2: 2.6.18-92.el5
> > >>
> > >> - RedHat EL5 up3: 2.6.18-128.el5
> > >>
> > >> - OEL 4.5: 2.6.9-55.ELsmp
> > >>
> > >> - OEL 5.2: 2.6.18-92.el5
> > >>
> > >> - CentOS 5.2: 2.6.18-92.el5
> > >>
> > >> - Fedora C9: 2.6.25-14.fc9 *
> > >>
> > >> - SLES10: 2.6.16.21-0.8-smp
> > >>
> > >> - SLES10 SP1: 2.6.16.46-0.12-smp
> > >>
> > >> - SLES10 SP1 up1: 2.6.16.53-0.16-smp
> > >>
> > >> - SLES10 SP2: 2.6.16.60-0.21-smp
> > >>
> > >> - SLES11 RC3: 2.6.27.13-1-default
> > >>
> > >> - OpenSuSE 10.3: 2.6.22.5-31 *
> > >>
> > >> - kernel.org <http://kernel.org>: 2.6.26
> and
> > >> 2.6.27
> > >>
> > >> * Minimal QA for these versions
> > >>
> > >> Systems:
> > >>
> > >> * x86_64
> > >>
> > >> * x86
> > >>
> > >> * ia64
> > >>
> > >> * ppc64
> > >>
> > >>
> > >> Main Changes from OFED-1.4
> > >>
> > >> ======================
> > >>
> > >> - Added support for RHEL 5.3 and SLES11 RC3
> > >>
> > >> - Added RHEL 5.2 backports for NFS/RDMA
> > >>
> > >> - Updated MPI packages:
> > >>
> > >> mvapich-1.1.0-3143
> > >>
> > >> Open MPI 1.3.1-rc4
> > >>
> > >> - Updated bonding package: ib-bonding-0.9.0-38
> > >>
> > >> - Updated opensm version to include critical bug fixes
> > >>
> > >> - Fixed RDS iWARP support
> > >>
> > >> - Low level drivers updated: ehca, mlx4, cxgb3, nes
> > >>
> > >> - Bug fixes
> > >>
> > >> - Attached kernel git tree changes for details
> > >>
> > >> <<ofa_kernel-1.4_1.4.1-rc1.log>>
> > >>
> > >> Tasks that should be completed for RC2:
> > >>
> > >> =============================
> > >>
> > >> 1. High priority bug fixes
> > >>
> > >> 2. RHEL 5.2 32 bits compilation issue (due to NFS/RDMA
> backports)
> > >>
> > >> 3. Open MPI 1.3.1 release
> > >>
> > >> 4. MVAPICH 1.1.1.minor release with critical bug fixes
> > >>
> > >> 5. OSM release 3.2.6
> > >>
> > >> 6. Documentation update
> > >>
> > >>
> > >> _______________________________________________
> > >> general mailing list
> > >> general_at_[hidden] <mailto:general_at_[hidden]
> >
> > >> http://lists.openfabrics.org/cgi-bin/mailman/listinfo/general
> > >>
> > >> To unsubscribe, please visit
> > >> http://openib.org/mailman/listinfo/openib-general
> > >>
> > >>
> > >> _______________________________________________
> > >> general mailing list
> > >> general_at_[hidden] <mailto:general_at_[hidden]
> >
> > >> http://lists.openfabrics.org/cgi-bin/mailman/listinfo/general
> > >>
> > >> To unsubscribe, please visit
> > >> http://openib.org/mailman/listinfo/openib-general
> > >
> > >
> > > --
> > > Jeff Squyres
> > > Cisco Systems
> > >
> > >
> ------------------------------------------------------------------------
> > >
> > > _______________________________________________
> > > devel mailing list
> > > devel_at_[hidden]
> > > http://www.open-mpi.org/mailman/listinfo.cgi/devel
> >
> > _______________________________________________
> > devel mailing list
> > devel_at_[hidden]
> > http://www.open-mpi.org/mailman/listinfo.cgi/devel
> >
> _______________________________________________
> devel mailing list
> devel_at_[hidden]
> http://www.open-mpi.org/mailman/listinfo.cgi/devel

-- 
Jeff Squyres
Cisco Systems