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Subject: Re: [OMPI devel] === CREATE FAILURE ===
From: Josh Hursey (jjhursey_at_[hidden])
Date: 2007-11-09 07:05:19


Sorry about this. I fixed the problem in r16706.

It seems that an old version of BLCR is installed in the default path
on the IU machine that builds the Open MPI tarballs. This has not
been a problem in the past since I have not been using any new
features of BLCR. Since I am starting to use some of this new
functionality the IU machine was not able to find the right symbols
and died. I implemented some configure checks to work around this.

Sorry again,
Josh

On Nov 8, 2007, at 9:13 PM, MPI Team wrote:

>
> ERROR: Command returned a non-zero exist status
> make -j 4 distcheck
>
> Start time: Thu Nov 8 21:00:26 EST 2007
> End time: Thu Nov 8 21:13:07 EST 2007
>
> ======================================================================
> =
> [... previous lines snipped ...]
> /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -
> I. -I../opal/include -I../orte/include -I../ompi/include -I../opal/
> mca/paffinity/linux/plpa/src/libplpa -I../../opal -I../.. -I.. -
> I../../opal/include -I../../orte/include -I../../ompi/include -
> O3 -DNDEBUG -finline-functions -fno-strict-aliasing -pthread -MT
> threads/condition.lo -MD -MP -MF $depbase.Tpo -c -o threads/
> condition.lo ../../opal/threads/condition.c &&\
> mv -f $depbase.Tpo $depbase.Plo
> libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../opal/include -I../
> orte/include -I../ompi/include -I../opal/mca/paffinity/linux/plpa/
> src/libplpa -I../../opal -I../.. -I.. -I../../opal/include -I../../
> orte/include -I../../ompi/include -O3 -DNDEBUG -finline-functions -
> fno-strict-aliasing -pthread -MT runtime/opal_params.lo -MD -MP -MF
> runtime/.deps/opal_params.Tpo -c ../../opal/runtime/opal_params.c -
> fPIC -DPIC -o runtime/.libs/opal_params.o
> libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../opal/include -I../
> orte/include -I../ompi/include -I../opal/mca/paffinity/linux/plpa/
> src/libplpa -I../../opal -I../.. -I.. -I../../opal/include -I../../
> orte/include -I../../ompi/include -O3 -DNDEBUG -finline-functions -
> fno-strict-aliasing -pthread -MT runtime/opal_cr.lo -MD -MP -MF
> runtime/.deps/opal_cr.Tpo -c ../../opal/runtime/opal_cr.c -fPIC -
> DPIC -o runtime/.libs/opal_cr.o
> libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../opal/include -I../
> orte/include -I../ompi/include -I../opal/mca/paffinity/linux/plpa/
> src/libplpa -I../../opal -I../.. -I.. -I../../opal/include -I../../
> orte/include -I../../ompi/include -O3 -DNDEBUG -finline-functions -
> fno-strict-aliasing -pthread -MT threads/condition.lo -MD -MP -MF
> threads/.deps/condition.Tpo -c ../../opal/threads/condition.c -
> fPIC -DPIC -o threads/.libs/condition.o
> depbase=`echo threads/mutex.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
> /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -
> I. -I../opal/include -I../orte/include -I../ompi/include -I../opal/
> mca/paffinity/linux/plpa/src/libplpa -I../../opal -I../.. -I.. -
> I../../opal/include -I../../orte/include -I../../ompi/include -
> O3 -DNDEBUG -finline-functions -fno-strict-aliasing -pthread -MT
> threads/mutex.lo -MD -MP -MF $depbase.Tpo -c -o threads/
> mutex.lo ../../opal/threads/mutex.c &&\
> mv -f $depbase.Tpo $depbase.Plo
> depbase=`echo threads/thread.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
> /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -
> I. -I../opal/include -I../orte/include -I../ompi/include -I../opal/
> mca/paffinity/linux/plpa/src/libplpa -I../../opal -I../.. -I.. -
> I../../opal/include -I../../orte/include -I../../ompi/include -
> O3 -DNDEBUG -finline-functions -fno-strict-aliasing -pthread -MT
> threads/thread.lo -MD -MP -MF $depbase.Tpo -c -o threads/
> thread.lo ../../opal/threads/thread.c &&\
> mv -f $depbase.Tpo $depbase.Plo
> libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../opal/include -I../
> orte/include -I../ompi/include -I../opal/mca/paffinity/linux/plpa/
> src/libplpa -I../../opal -I../.. -I.. -I../../opal/include -I../../
> orte/include -I../../ompi/include -O3 -DNDEBUG -finline-functions -
> fno-strict-aliasing -pthread -MT threads/mutex.lo -MD -MP -MF
> threads/.deps/mutex.Tpo -c ../../opal/threads/mutex.c -fPIC -DPIC -
> o threads/.libs/mutex.o
> libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../opal/include -I../
> orte/include -I../ompi/include -I../opal/mca/paffinity/linux/plpa/
> src/libplpa -I../../opal -I../.. -I.. -I../../opal/include -I../../
> orte/include -I../../ompi/include -O3 -DNDEBUG -finline-functions -
> fno-strict-aliasing -pthread -MT threads/thread.lo -MD -MP -MF
> threads/.deps/thread.Tpo -c ../../opal/threads/thread.c -fPIC -
> DPIC -o threads/.libs/thread.o
> depbase=`echo threads/tsd.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
> /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -
> I. -I../opal/include -I../orte/include -I../ompi/include -I../opal/
> mca/paffinity/linux/plpa/src/libplpa -I../../opal -I../.. -I.. -
> I../../opal/include -I../../orte/include -I../../ompi/include -
> O3 -DNDEBUG -finline-functions -fno-strict-aliasing -pthread -MT
> threads/tsd.lo -MD -MP -MF $depbase.Tpo -c -o threads/tsd.lo ../../
> opal/threads/tsd.c &&\
> mv -f $depbase.Tpo $depbase.Plo
> libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../opal/include -I../
> orte/include -I../ompi/include -I../opal/mca/paffinity/linux/plpa/
> src/libplpa -I../../opal -I../.. -I.. -I../../opal/include -I../../
> orte/include -I../../ompi/include -O3 -DNDEBUG -finline-functions -
> fno-strict-aliasing -pthread -MT threads/tsd.lo -MD -MP -MF
> threads/.deps/tsd.Tpo -c ../../opal/threads/tsd.c -fPIC -DPIC -o
> threads/.libs/tsd.o
> /bin/sh ../libtool --tag=CC --mode=link gcc -O3 -DNDEBUG -
> finline-functions -fno-strict-aliasing -pthread -export-dynamic -
> o libopen-pal.la -rpath /home/mpiteam/openmpi/nightly-tarball-build-
> root/trunk/create-r16694/ompi/openmpi-1.3a1r16694/_inst/lib class/
> opal_free_list.lo class/opal_hash_table.lo class/opal_list.lo class/
> opal_object.lo class/opal_atomic_lifo.lo class/opal_value_array.lo
> memoryhooks/memory.lo runtime/opal_progress.lo runtime/
> opal_finalize.lo runtime/opal_init.lo runtime/opal_params.lo
> runtime/opal_cr.lo threads/condition.lo threads/mutex.lo threads/
> thread.lo threads/tsd.lo ../opal/libltdl/libltdlc.la asm/libasm.la
> event/libevent.la mca/base/libmca_base.la util/libopalutil.la mca/
> backtrace/libmca_backtrace.la mca/backtrace/execinfo/
> libmca_backtrace_execinfo.la mca/crs/libmca_crs.la mca/
> installdirs/libmca_installdirs.la mca/installdirs/config/
> libmca_installdirs_config.la mca/installdirs/env/
> libmca_installdirs_env.la mca/maffinity/libmca_maffinity.la mca/
> memcpy/libmca_memcpy.la mca/memory/libmca_memory.la mca/memory/
> ptmalloc2/libmca_memory_ptmalloc2.la mca/paffinity/
> libmca_paffinity.la mca/timer/libmca_timer.la mca/timer/linux/
> libmca_timer_linux.la -lnsl -lutil -lm
> libtool: link: gcc -shared class/.libs/opal_free_list.o
> class/.libs/opal_hash_table.o class/.libs/opal_list.o class/.libs/
> opal_object.o class/.libs/opal_atomic_lifo.o class/.libs/
> opal_value_array.o memoryhooks/.libs/memory.o runtime/.libs/
> opal_progress.o runtime/.libs/opal_finalize.o runtime/.libs/
> opal_init.o runtime/.libs/opal_params.o runtime/.libs/opal_cr.o
> threads/.libs/condition.o threads/.libs/mutex.o threads/.libs/
> thread.o threads/.libs/tsd.o -Wl,--whole-archive ../opal/
> libltdl/.libs/libltdlc.a asm/.libs/libasm.a event/.libs/libevent.a
> mca/base/.libs/libmca_base.a util/.libs/libopalutil.a mca/
> backtrace/.libs/libmca_backtrace.a mca/backtrace/execinfo/.libs/
> libmca_backtrace_execinfo.a mca/crs/.libs/libmca_crs.a mca/
> installdirs/.libs/libmca_installdirs.a mca/installdirs/config/.libs/
> libmca_installdirs_config.a mca/installdirs/env/.libs/
> libmca_installdirs_env.a mca/maffinity/.libs/libmca_maffinity.a mca/
> memcpy/.libs/libmca_memcpy.a mca/memory/.libs/libmca_memory.a mca/
> memory/ptmalloc2/.libs/libmca_memory_ptmalloc2.a mca/
> paffinity/.libs/libmca_paffinity.a mca/timer/.libs/libmca_timer.a
> mca/timer/linux/.libs/libmca_timer_linux.a -Wl,--no-whole-archive -
> ldl -lnsl -lutil -lm -pthread -pthread -Wl,-soname -Wl,libopen-
> pal.so.0 -o .libs/libopen-pal.so.0.0.0
> libtool: link: (cd ".libs" && rm -f "libopen-pal.so.0" && ln -s
> "libopen-pal.so.0.0.0" "libopen-pal.so.0")
> libtool: link: (cd ".libs" && rm -f "libopen-pal.so" && ln -s
> "libopen-pal.so.0.0.0" "libopen-pal.so")
> libtool: link: creating libopen-pal.la
> libtool: link: ( cd ".libs" && rm -f "libopen-pal.la" && ln -s "../
> libopen-pal.la" "libopen-pal.la" )
> make[3]: Leaving directory `/home/mpiteam/openmpi/nightly-tarball-
> build-root/trunk/create-r16694/ompi/openmpi-1.3a1r16694/_build/opal'
> Making all in mca/crs/blcr
> make[3]: Entering directory `/home/mpiteam/openmpi/nightly-tarball-
> build-root/trunk/create-r16694/ompi/openmpi-1.3a1r16694/_build/opal/
> mca/crs/blcr'
> depbase=`echo crs_blcr_component.lo | sed 's|[^/]*$|.deps/&|;s|\.lo
> $||'`;\
> /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -
> DHAVE_CONFIG_H -I. -I../../../../opal/include -I../../../../orte/
> include -I../../../../ompi/include -I../../../../opal/mca/paffinity/
> linux/plpa/src/libplpa -I../../../../../opal/mca/crs/blcr -
> I../../../../.. -I../../../.. -I../../../../../opal/include -
> I../../../../../orte/include -I../../../../../ompi/include -O3 -
> DNDEBUG -finline-functions -fno-strict-aliasing -pthread -MT
> crs_blcr_component.lo -MD -MP -MF $depbase.Tpo -c -o
> crs_blcr_component.lo ../../../../../opal/mca/crs/blcr/
> crs_blcr_component.c &&\
> mv -f $depbase.Tpo $depbase.Plo
> depbase=`echo crs_blcr_module.lo | sed 's|[^/]*$|.deps/&|;s|\.lo
> $||'`;\
> /bin/sh ../../../../libtool --tag=CC --mode=compile gcc -
> DHAVE_CONFIG_H -I. -I../../../../opal/include -I../../../../orte/
> include -I../../../../ompi/include -I../../../../opal/mca/paffinity/
> linux/plpa/src/libplpa -I../../../../../opal/mca/crs/blcr -
> I../../../../.. -I../../../.. -I../../../../../opal/include -
> I../../../../../orte/include -I../../../../../ompi/include -O3 -
> DNDEBUG -finline-functions -fno-strict-aliasing -pthread -MT
> crs_blcr_module.lo -MD -MP -MF $depbase.Tpo -c -o
> crs_blcr_module.lo ../../../../../opal/mca/crs/blcr/
> crs_blcr_module.c &&\
> mv -f $depbase.Tpo $depbase.Plo
> libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../opal/
> include -I../../../../orte/include -I../../../../ompi/include -
> I../../../../opal/mca/paffinity/linux/plpa/src/libplpa -
> I../../../../../opal/mca/crs/blcr -I../../../../.. -I../../../.. -
> I../../../../../opal/include -I../../../../../orte/include -
> I../../../../../ompi/include -O3 -DNDEBUG -finline-functions -fno-
> strict-aliasing -pthread -MT crs_blcr_module.lo -MD -MP -MF .deps/
> crs_blcr_module.Tpo -c ../../../../../opal/mca/crs/blcr/
> crs_blcr_module.c -fPIC -DPIC -o .libs/crs_blcr_module.o
> libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../opal/
> include -I../../../../orte/include -I../../../../ompi/include -
> I../../../../opal/mca/paffinity/linux/plpa/src/libplpa -
> I../../../../../opal/mca/crs/blcr -I../../../../.. -I../../../.. -
> I../../../../../opal/include -I../../../../../orte/include -
> I../../../../../ompi/include -O3 -DNDEBUG -finline-functions -fno-
> strict-aliasing -pthread -MT crs_blcr_component.lo -MD -MP -
> MF .deps/crs_blcr_component.Tpo -c ../../../../../opal/mca/crs/blcr/
> crs_blcr_component.c -fPIC -DPIC -o .libs/crs_blcr_component.o
> ../../../../../opal/mca/crs/blcr/crs_blcr_module.c: In function
> `opal_crs_blcr_thread_callback':
> ../../../../../opal/mca/crs/blcr/crs_blcr_module.c:634: error:
> structure has no member named `requester'
> ../../../../../opal/mca/crs/blcr/crs_blcr_module.c:635: error:
> `CR_CHECKPOINT_OMIT' undeclared (first use in this function)
> ../../../../../opal/mca/crs/blcr/crs_blcr_module.c:635: error:
> (Each undeclared identifier is reported only once
> ../../../../../opal/mca/crs/blcr/crs_blcr_module.c:635: error: for
> each function it appears in.)
> ../../../../../opal/mca/crs/blcr/crs_blcr_module.c:640: error:
> structure has no member named `requester'
> ../../../../../opal/mca/crs/blcr/crs_blcr_module.c: In function
> `opal_crs_blcr_signal_callback':
> ../../../../../opal/mca/crs/blcr/crs_blcr_module.c:682: error:
> structure has no member named `requester'
> ../../../../../opal/mca/crs/blcr/crs_blcr_module.c:683: error:
> `CR_CHECKPOINT_OMIT' undeclared (first use in this function)
> make[3]: *** [crs_blcr_module.lo] Error 1
> make[3]: Leaving directory `/home/mpiteam/openmpi/nightly-tarball-
> build-root/trunk/create-r16694/ompi/openmpi-1.3a1r16694/_build/opal/
> mca/crs/blcr'
> make[2]: *** [all-recursive] Error 1
> make[2]: Leaving directory `/home/mpiteam/openmpi/nightly-tarball-
> build-root/trunk/create-r16694/ompi/openmpi-1.3a1r16694/_build/opal'
> make[1]: *** [all-recursive] Error 1
> make[1]: Leaving directory `/home/mpiteam/openmpi/nightly-tarball-
> build-root/trunk/create-r16694/ompi/openmpi-1.3a1r16694/_build'
> make: *** [distcheck] Error 2
> ======================================================================
> =
>
> Your friendly daemon,
> Cyrador
> _______________________________________________
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